Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq14910 100 4e-16
seq14909 100 4e-16
>seq14910
Length=9531
Score = 100 bits (110), Expect = 4e-16
Identities = 116/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 193443 ATACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 193501
|||||||||| || ||||| ||| ||| || |||| | | |||||||| ||| ||
Sbjct 4696 ATACCTGAAACGGGAGATAAGTTTGCATCAAGACATGGAC-AGAAAGGAACCGTTGGAAT 4754
Query 193502 GATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTAT 193561
| ||| ||||||||||||||||||||| || ||| || ||||||||||||||
Sbjct 4755 CTTATATAGACAAGAAGATATGCCATTTACCTCTGAAGGGATTTGTCCAGATATTATTAT 4814
Query 193562 TAATCCAAATTGTATTCCATCCAGAATGACCATT 193595
|||||| || |||||||| ||||||| |||
Sbjct 4815 TAATCCTCATGCGATTCCATCTCGAATGACGATT 4848
>seq14909
Length=9444
Score = 100 bits (110), Expect = 4e-16
Identities = 116/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 193443 ATACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 193501
|||||||||| || ||||| ||| ||| || |||| | | |||||||| ||| ||
Sbjct 4696 ATACCTGAAACGGGAGATAAGTTTGCATCAAGACATGGAC-AGAAAGGAACCGTTGGAAT 4754
Query 193502 GATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTAT 193561
| ||| ||||||||||||||||||||| || ||| || ||||||||||||||
Sbjct 4755 CTTATATAGACAAGAAGATATGCCATTTACCTCTGAAGGGATTTGTCCAGATATTATTAT 4814
Query 193562 TAATCCAAATTGTATTCCATCCAGAATGACCATT 193595
|||||| || |||||||| ||||||| |||
Sbjct 4815 TAATCCTCATGCGATTCCATCTCGAATGACGATT 4848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635004839632520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |