Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq14910 91.5 2e-13 seq14909 91.5 2e-13 >seq14910 Length=9531 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 192996 ATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 193054 |||||||||| || ||||| ||| || || |||| | | |||||||| ||| || Sbjct 4696 ATACCTGAAACGGGAGATAAGTTTGCATCAAGACATGGAC-AGAAAGGAACCGTTGGAAT 4754 Query 193055 GATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTAT 193114 | ||| ||||||||||||||||||||| || ||| || |||||||||||||| Sbjct 4755 CTTATATAGACAAGAAGATATGCCATTTACCTCTGAAGGGATTTGTCCAGATATTATTAT 4814 Query 193115 TAATCCAAATTGTATTCCGTCCAGAATGACCATT 193148 |||||| || ||||| || ||||||| ||| Sbjct 4815 TAATCCTCATGCGATTCCATCTCGAATGACGATT 4848 >seq14909 Length=9444 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 192996 ATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 193054 |||||||||| || ||||| ||| || || |||| | | |||||||| ||| || Sbjct 4696 ATACCTGAAACGGGAGATAAGTTTGCATCAAGACATGGAC-AGAAAGGAACCGTTGGAAT 4754 Query 193055 GATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTAT 193114 | ||| ||||||||||||||||||||| || ||| || |||||||||||||| Sbjct 4755 CTTATATAGACAAGAAGATATGCCATTTACCTCTGAAGGGATTTGTCCAGATATTATTAT 4814 Query 193115 TAATCCAAATTGTATTCCGTCCAGAATGACCATT 193148 |||||| || ||||| || ||||||| ||| Sbjct 4815 TAATCCTCATGCGATTCCATCTCGAATGACGATT 4848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628360247370240