Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq19309 95.1 1e-14 >seq19309 Length=20099 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || ||||| ||||| ||||| || || |||| ||||| || ||||| |||||||||||| Sbjct 2209 TGACCTCCACGTAATCGCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCG 2150 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 | ||| | | |||||| | ||||||||| ||| |||| | || || || || || Sbjct 2149 GCAAGTGTTCGCCCGTCTTCCAATTGTTTACCTGCAAAGATTAATCGCTGTTGGTCTGGT 2090 Query 137302 GGTATGCCTTCTTTGTC 137318 || || ||||| ||||| Sbjct 2089 GGGATACCTTCCTTGTC 2073 Score = 93.3 bits (102), Expect = 4e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || | ||| | || ||||||| || ||||| || || |||||||||||| | Sbjct 1340 CCACCACGCAGACGGAGTACCAAATGAAGAGTGGATTCCTTCTGAATGTTGTAATCGGCC 1281 Query 137245 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | |||| || | ||||| |||||||| || ||| |||| |||||||| || || || || Sbjct 1280 AGGGTGCGTCCA-TCTTCAAGTTGTTTTCCGGCAAAGATGAGACGTTGTTGGTCTGGTGG 1222 Query 137304 TATGCCTTCTTTGTC 137318 || ||||||||||| Sbjct 1221 AATACCTTCTTTGTC 1207 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || |||| ||| | || | ||||| || ||||| || || || |||||||| Sbjct 1918 CCACCACGTAGACGGAGCACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCAGCG 1859 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | ||||| ||||| ||||||||||||||| | ||||||||||| ||||| || || Sbjct 1858 AGTGTGCGACCATCTTCCAGTTGTTTACCAGCAAAAATCAGACGTTGTTGATCTGGGGGA 1799 Query 137305 ATGCCTTCTTTGTC 137318 |||||||| ||||| Sbjct 1798 ATGCCTTCCTTGTC 1785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488411122138800