Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq19309 82.4 7e-11 >seq19309 Length=20099 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 25196 TTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAA 25255 || || ||||| | ||||| ||||||||||| || ||| || || || | || || Sbjct 1427 TTGACTGGAAAGACCATCACTCTCGAAGTCGAATCCTCCGACACAATTGACAATGTCAAG 1486 Query 25256 CAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGC 25315 || ||| || || |||||||| || || ||||| ||| | || || | | || Sbjct 1487 GCCAAGATTCAAGACAAGGAGGGTATCCCTCCTGATCAACAACGTCTTATCTTTGCAGGA 1546 Query 25316 AAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATT 25375 || ||||| ||||| | | ||| | || || ||||| ||||| ||||| |||||| || Sbjct 1547 AAGCAACTTGAAGACGGTCGAACTCTCGCTGACTACAACATTCAGAAAGAGTCCACCCTT 1606 Query 25376 CATTTAGT 25383 || || || Sbjct 1607 CACTTGGT 1614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444973339886880