Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 82.4 7e-11
>seq19309
Length=20099
Score = 82.4 bits (90), Expect = 7e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 25196 TTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAA 25255
|| || ||||| | ||||| ||||||||||| || ||| || || || | || ||
Sbjct 1427 TTGACTGGAAAGACCATCACTCTCGAAGTCGAATCCTCCGACACAATTGACAATGTCAAG 1486
Query 25256 CAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGC 25315
|| ||| || || |||||||| || || ||||| ||| | || || | | ||
Sbjct 1487 GCCAAGATTCAAGACAAGGAGGGTATCCCTCCTGATCAACAACGTCTTATCTTTGCAGGA 1546
Query 25316 AAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATT 25375
|| ||||| ||||| | | ||| | || || ||||| ||||| ||||| |||||| ||
Sbjct 1547 AAGCAACTTGAAGACGGTCGAACTCTCGCTGACTACAACATTCAGAAAGAGTCCACCCTT 1606
Query 25376 CATTTAGT 25383
|| || ||
Sbjct 1607 CACTTGGT 1614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444973339886880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |