Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq18860 86.0 8e-12 >seq18860 Length=11993 Score = 86.0 bits (94), Expect = 8e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 182696 TTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAAC 182755 ||| || ||||||||||| ||||| || | |||||| || | ||| || | || ||||| Sbjct 10653 TTTTCCACGAAGTGGGAAAACACCATAATTATCACGTCCGATGACCGATAATCCAGCAAC 10712 Query 182756 CGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGTGC 182815 || | || ||| || ||||| || ||||| | ||||||||||| | | | | || Sbjct 10713 AGCCAAGGATTTGGCTGAATCTCCTTCCGTTAAGATGAGAGTACAATCTGCTGCTTTCTT 10772 Query 182816 CGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGGTAAT 182860 || || || || || || || ||||| ||| |||||||| || Sbjct 10773 GGTCCCTGCGTTATTGGCATCTTCCAATTTGACGATACCGGTGAT 10817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627861183146400