Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq18860 86.0 8e-12
>seq18860
Length=11993
Score = 86.0 bits (94), Expect = 8e-12
Identities = 118/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 182696 TTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAAC 182755
||| || ||||||||||| ||||| || | |||||| || | ||| || | || |||||
Sbjct 10653 TTTTCCACGAAGTGGGAAAACACCATAATTATCACGTCCGATGACCGATAATCCAGCAAC 10712
Query 182756 CGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGTGC 182815
|| | || ||| || ||||| || ||||| | ||||||||||| | | | | ||
Sbjct 10713 AGCCAAGGATTTGGCTGAATCTCCTTCCGTTAAGATGAGAGTACAATCTGCTGCTTTCTT 10772
Query 182816 CGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACCGGTAAT 182860
|| || || || || || || ||||| ||| |||||||| ||
Sbjct 10773 GGTCCCTGCGTTATTGGCATCTTCCAATTTGACGATACCGGTGAT 10817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627861183146400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |