Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4808 116 5e-21 >seq4808 Length=7665 Score = 116 bits (128), Expect = 5e-21 Identities = 154/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010 || || || || || || ||||| ||||||| || |||||| || |||| |||| Sbjct 5943 ATTTGGAAGCCATAGAAGCATCTGGCTTCAGCCGCTTGAACCTCTCCACTGAATCTTTCA 5884 Query 47011 GACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATA 47070 ||| || || || || |||||||| ||||||||| || || || |||||||| ||| Sbjct 5883 ATCAAGTTTTCGTTGACAATTCCATCCGAAGCAGCAAAGAAAGCTAAGACATGTTTGATA 5824 Query 47071 AAATATTTTTCATCGGTAGTCAGTTTATTC---CAGTCATTGATATCTTTTGATATATCT 47127 || | ||| ||||| | ||| | | ||| || || | ||||| || || | ||| Sbjct 5823 AAGTGTTTCTCATCATCATTCAATCTGTTCTCCCAATCGTGCATATCCTTCGAAAGATCG 5764 Query 47128 ACTTCTTCAGCTGTCCAGAATGACGCCTCTGCT 47160 | |||||| |||||||||||||| ||||| ||| Sbjct 5763 ATTTCTTCGGCTGTCCAGAATGAAGCCTCGGCT 5731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712740490754880