Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4808 104 2e-17 >seq4808 Length=7665 Score = 104 bits (114), Expect = 2e-17 Identities = 159/224 (71%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 ||| || || ||||| || ||||| ||||||| | |||||| || | ||||||| Sbjct 5944 AATTTGGAAGCCATAGAAGCATCTGGCTTCAGCCGCTTGAACCTCTCCACTGAATCTTTC 5885 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | || |||||||| ||||| ||||| ||||||||||||||| | |||| ||| || Sbjct 5884 AATCAAGTTTTCGTTGACAATTCCATCCGAAGCAGCAAAGAAAGCTAAGACATGTTTGAT 5825 Query 23952 AAAATGTCTTTCATCAGTTGAT--AAT---TTTTTCCAATCATTAATATCTTTTGATAAA 24006 ||| ||| | |||||| | || ||| || | |||||| | ||||| || || | | Sbjct 5824 AAAGTGTTTCTCATCA--TCATTCAATCTGTTCTCCCAATCGTGCATATCCTTCGAAAGA 5767 Query 24007 TCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050 || | ||| || ||||||| || ||| ||| ||||| || Sbjct 5766 TCGATTTCTTCGGCTGTCCAGAATGAAGCCTCGGCTCGCTTGTA 5723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521346161782600