Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq4808 104 2e-17
>seq4808
Length=7665
Score = 104 bits (114), Expect = 2e-17
Identities = 159/224 (71%), Gaps = 7/224 (3%)
Strand=Plus/Minus
Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891
||| || || ||||| || ||||| ||||||| | |||||| || | |||||||
Sbjct 5944 AATTTGGAAGCCATAGAAGCATCTGGCTTCAGCCGCTTGAACCTCTCCACTGAATCTTTC 5885
Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951
| || |||||||| ||||| ||||| ||||||||||||||| | |||| ||| ||
Sbjct 5884 AATCAAGTTTTCGTTGACAATTCCATCCGAAGCAGCAAAGAAAGCTAAGACATGTTTGAT 5825
Query 23952 AAAATGTCTTTCATCAGTTGAT--AAT---TTTTTCCAATCATTAATATCTTTTGATAAA 24006
||| ||| | |||||| | || ||| || | |||||| | ||||| || || | |
Sbjct 5824 AAAGTGTTTCTCATCA--TCATTCAATCTGTTCTCCCAATCGTGCATATCCTTCGAAAGA 5767
Query 24007 TCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050
|| | ||| || ||||||| || ||| ||| ||||| ||
Sbjct 5766 TCGATTTCTTCGGCTGTCCAGAATGAAGCCTCGGCTCGCTTGTA 5723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521346161782600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |