Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 98.7 7e-16
>seq19309
Length=20099
Score = 98.7 bits (108), Expect = 7e-16
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 44122 TCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTC 44181
|| ||| |||| |||||| || ||||||||| |||||||||||||| ||| ||| |
Sbjct 2195 TCGCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGCAAGTGTTCGCCC 2136
Query 44182 GTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241
||| |||| || || || |||||||| || ||||| || |||| || | |||||||||
Sbjct 2135 GTCTTCCAATTGTTTACCTGCAAAGATTAATCGCTGTTGGTCTGGTGGGATACCTTCCTT 2076
Query 44242 TTCCGTTATCTT 44253
||| |||||
Sbjct 2075 GTCCTGAATCTT 2064
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/191 (71%), Gaps = 4/191 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||| ||| ||||| || |||||||||||||| || ||| | || ||
Sbjct 1322 ACCAAATGAAGAGTGGATTCCTTCTGAATGTTGTAATCGGCCAGGGTGCGTCCATCTTCA 1263
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| || || ||||||||||| | ||| || || |||| || | |||||| || ||
Sbjct 1262 AGTTGTTTTCCGGCAAAGATGAGACGTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGA 1203
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||| |||| ||||| ||||| | || || ||||
Sbjct 1202 ATCTTGGCCTTGACATTGT--CAATGGTATCGGAAGATTCAACCTCGAGGGTGATGGTCT 1145
Query 44307 TTCCCGTGAGG 44317
| || ||||||
Sbjct 1144 TGCCGGTGAGG 1134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359894934933303
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |