Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq18420 84.2 3e-11
>seq18420
Length=14899
Score = 84.2 bits (92), Expect = 3e-11
Identities = 123/172 (72%), Gaps = 4/172 (2%)
Strand=Plus/Minus
Query 155877 ATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCA 155936
||||| || || || ||||| ||||| || || || | | |||||| || |||
Sbjct 6772 ATTTGTAGTCGACCTCCCTCATCAGGTAAAGAGATCTCCATGTGAACTTCCAATCGACCA 6713
Query 155937 GGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATG 155996
|||| ||| | |||||| ||||| | ||| | | |||||||| || ||||| || |||
Sbjct 6712 GGTCGTAAAAGTGCTTCATCAATCATGTCTAGACGATTGGTCATTCCGATGATCAAGATG 6653
Query 155997 TTGTTTAAAGAT--TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046
||||| ||| | ||||||||||| || || || | | |||||| || ||
Sbjct 6652 TTGTT--AAGTTGGTCTACACCGTCCATCTTGGAGAGAAGTTGATTCACGAC 6603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666893763884040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |