Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq18420 84.2 3e-11 >seq18420 Length=14899 Score = 84.2 bits (92), Expect = 3e-11 Identities = 123/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 155877 ATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCA 155936 ||||| || || || ||||| ||||| || || || | | |||||| || ||| Sbjct 6772 ATTTGTAGTCGACCTCCCTCATCAGGTAAAGAGATCTCCATGTGAACTTCCAATCGACCA 6713 Query 155937 GGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATG 155996 |||| ||| | |||||| ||||| | ||| | | |||||||| || ||||| || ||| Sbjct 6712 GGTCGTAAAAGTGCTTCATCAATCATGTCTAGACGATTGGTCATTCCGATGATCAAGATG 6653 Query 155997 TTGTTTAAAGAT--TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 ||||| ||| | ||||||||||| || || || | | |||||| || || Sbjct 6652 TTGTT--AAGTTGGTCTACACCGTCCATCTTGGAGAGAAGTTGATTCACGAC 6603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666893763884040