Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 113 1e-19 >seq6 Length=2534666 Score = 113 bits (124), Expect = 1e-19 Identities = 220/320 (69%), Gaps = 10/320 (3%) Strand=Plus/Minus Query 282443 GGGAAAACAGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATC 282502 ||| || ||| || || ||||| |||| ||||| ||||||| ||| || ||| Sbjct 1951011 GGGGAACCAGTAATCGAGGAAGTTGATGATTAGACCCTTGATGTGAGATCCATCGTGATC 1950952 Query 282503 CGCGTCGGTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTT 282562 | |||| ||||||||| | | || || | || || ||| ||||||| || Sbjct 1950951 CTGATCGGCCATGATCATGAGCTTGCCATAACGGAGCGAGTCGACGTCGGTGTACACCTT 1950892 Query 282563 ACCGGTTTGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATAC- 282621 || || || ||||||||||| |||| ||| ||| || | || | | | || Sbjct 1950891 GCCCTGCTGCAGACCCAAAATTTGCTTGATCGCTTGGATCTCAGCATTGTC-GAGCAACG 1950833 Query 282622 --TTGCCACAGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATA 282679 ||||| | || ||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 1950832 CCTTGCCCGCG--GCTTCGCGCACGTTGAGCAACTTCCCTCGCAGAGGGAAAACACCATA 1950775 Query 282680 TCTCTCGCGACCGACCACGGACAGTCCTGCAATTGCAAGTG--TTGCTGCGGAATCTCCC 282737 | || |||||||| |||||||| || | | || || | ||| ||||||||||| Sbjct 1950774 GTTGTCTCGACCGACGACGGACAGACCCGAGACGGCGAGCGCCTTG--GCGGAATCTCCT 1950717 Query 282738 TCCGTCAAGATGAGAGTACA 282757 || ||||||||||| || || Sbjct 1950716 TCAGTCAAGATGAGCGTGCA 1950697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823674719120