Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 113 1e-19
>seq6
Length=2534666
Score = 113 bits (124), Expect = 1e-19
Identities = 220/320 (69%), Gaps = 10/320 (3%)
Strand=Plus/Minus
Query 282443 GGGAAAACAGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATC 282502
||| || ||| || || ||||| |||| ||||| ||||||| ||| || |||
Sbjct 1951011 GGGGAACCAGTAATCGAGGAAGTTGATGATTAGACCCTTGATGTGAGATCCATCGTGATC 1950952
Query 282503 CGCGTCGGTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTT 282562
| |||| ||||||||| | | || || | || || ||| ||||||| ||
Sbjct 1950951 CTGATCGGCCATGATCATGAGCTTGCCATAACGGAGCGAGTCGACGTCGGTGTACACCTT 1950892
Query 282563 ACCGGTTTGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATAC- 282621
|| || || ||||||||||| |||| ||| ||| || | || | | | ||
Sbjct 1950891 GCCCTGCTGCAGACCCAAAATTTGCTTGATCGCTTGGATCTCAGCATTGTC-GAGCAACG 1950833
Query 282622 --TTGCCACAGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATA 282679
||||| | || ||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 1950832 CCTTGCCCGCG--GCTTCGCGCACGTTGAGCAACTTCCCTCGCAGAGGGAAAACACCATA 1950775
Query 282680 TCTCTCGCGACCGACCACGGACAGTCCTGCAATTGCAAGTG--TTGCTGCGGAATCTCCC 282737
| || |||||||| |||||||| || | | || || | ||| |||||||||||
Sbjct 1950774 GTTGTCTCGACCGACGACGGACAGACCCGAGACGGCGAGCGCCTTG--GCGGAATCTCCT 1950717
Query 282738 TCCGTCAAGATGAGAGTACA 282757
|| ||||||||||| || ||
Sbjct 1950716 TCAGTCAAGATGAGCGTGCA 1950697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823674719120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |