Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 1e-12 >seq2 Length=936589 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/239 (69%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| | | ||||||||||| || || || || ||| | | | | | Sbjct 266857 TTCCAAGCACTGAGGATGATCCTTCTATCGGTCGGATTCTCCTTGATACTCTTGACGACC 266916 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCTG 102044 || | || || || || ||||| || |||||||| || | | | | || || | Sbjct 266917 TGCATCAACTGATCGACGCCTTCCCCCGTATAATCGT--CCTTCGCGGTCCTGTACTCGG 266974 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCAT 102104 ||||||||||||||||||| || ||||| || || || | ||| |||| || | | | Sbjct 266975 CTCCGAAATGCCTCCACTGGAACCCATAAACGGGACCCAAATCGCCTTGCTCGCGATGCT 267034 Query 102105 AAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCA 102163 || || || || || || ||| || ||||||||| |||||||||| | |||||| Sbjct 267035 TCAATCCGAGCTTGTCCAAGAATTGCCTCGATCCATTCCCATCCCAAATCTTGACGCCA 267093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251094334024