Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 >seq2 Length=936589 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 |||||||||| | | || ||||||||||| || || | || | || | | | Sbjct 266857 TTCCAAGCACTGAGGATGATCCTTCTATCGGTCGGATTCTCCTTGATACTCTTGACGACC 266916 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAA-GACCTTGATATTCTGC 97409 ||| | || ||||| |||||||| || ||||| || ||| | | || || || || Sbjct 266917 TGCATCAACTGATCGACGCCTTCCCCCGTATAATCGTCCTTCGCGGTCCTG-TACTCGGC 266975 Query 97410 TCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACA 97469 ||| ||||||||||| ||||| |||||||| || || | || |||| || | || Sbjct 266976 TCCGAAATGCCTCCACTGGAACCCATAAACGGGACCCAAATCGCCTTGCTCGCGATGCTT 267035 Query 97470 GAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 || || ||||| || || | ||| |||||||| |||||||||| Sbjct 267036 CAATCCGAGCTTGTCCAAGAATTGCCTCGATCCATTCCCATCCCAAAT 267083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783898565680