Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq23 131 1e-25
seq10 131 1e-25
seq1 127 2e-24
seq13 100 2e-16
>seq23
Length=1006473
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| ||||| |||||||||||| || |||||| |||||||
Sbjct 106611 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCG 106552
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| |||| | || ||||| || || || ||||| |||||||||
Sbjct 106551 AGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 106492
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||| | ||||||||||| ||| | ||| |||
Sbjct 106491 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 106432
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || ||||| || || || || ||| ||
Sbjct 106431 CCCGTAAGAGTCTTGACGAAGATTTGCCTG 106402
>seq10
Length=1653987
Score = 131 bits (144), Expect = 1e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| ||||| ||||||||||| | || || |||||||||||| ||||||
Sbjct 915094 GTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTCGAGCTGCTTTCCA 915153
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| | ||||||||||| ||||| ||||| |||||||| ||| || ||
Sbjct 915154 GCGAAGATCAATCGCTGCTGATCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTG 915213
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||||| | |||||||||| || | ||| || ||||||| ||
Sbjct 915214 ACGTTGTCGATCGTGTCCGAGGATTCGACCTCGAGCGTGATCGTCTTACCGGTCAAGGTC 915273
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| ||||||||
Sbjct 915274 TTGACAAAGATCTGCAT 915290
Score = 125 bits (138), Expect = 6e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| ||||| ||||||||||| | || || ||||||||||||||| ||
Sbjct 915322 GTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTCGAGCTGTTTGCCC 915381
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| ||||||||||||| || ||||| || || ||||||||||| ||| || |||
Sbjct 915382 GCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGCTTTG 915441
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||||| ||||||||||| ||| | || ||||| || |||||
Sbjct 915442 ACATTGTCAATCGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTC 915501
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||| || |||||
Sbjct 915502 TTGACAAAGATTTGCAT 915518
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||||| || || |||||||| ||| | |||||| || ||
Sbjct 1138162 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTC 1138221
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| ||||||| || ||||| ||||| || ||||||||||||||
Sbjct 1138222 GAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 1138281
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || ||||| | || | ||||||| |||||| || | || | ||| ||
Sbjct 1138282 AATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTT 1138341
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || || || || |||||
Sbjct 1138342 GCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | |||||| || ||||||||
Sbjct 1138397 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1138456
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| ||
Sbjct 1138457 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1138516
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | || | ||||||| |||||| || | || | ||| |||||||||
Sbjct 1138517 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1138576
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || |||||
Sbjct 1138577 AAGGTCTTGACGAAGATTTGCAT 1138599
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | |||||| || ||||||||
Sbjct 1138625 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1138684
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| ||
Sbjct 1138685 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1138744
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | || | ||||||| |||||| || | || | ||| |||||||||
Sbjct 1138745 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1138804
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || |||||
Sbjct 1138805 AAGGTCTTGACGAAGATTTGCAT 1138827
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | |||||| || ||||||||
Sbjct 1138853 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1138912
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| ||
Sbjct 1138913 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1138972
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | || | ||||||| |||||| || | || | ||| |||||||||
Sbjct 1138973 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139032
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || |||||
Sbjct 1139033 AAGGTCTTGACGAAGATTTGCAT 1139055
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | |||||| || ||||||||
Sbjct 1139081 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139140
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| ||
Sbjct 1139141 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1139200
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | || | ||||||| |||||| || | || | ||| |||||||||
Sbjct 1139201 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139260
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || |||||
Sbjct 1139261 AAGGTCTTGACGAAGATTTGCAT 1139283
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | |||||| || ||||||||
Sbjct 1139536 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139595
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| ||
Sbjct 1139596 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1139655
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | || | ||||||| |||||| || | || | ||| |||||||||
Sbjct 1139656 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139715
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || |||||
Sbjct 1139716 AAGGTCTTGACGAAGATTTGCAT 1139738
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | |||||| || ||||||||
Sbjct 1139764 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139823
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| ||
Sbjct 1139824 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1139883
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | || | ||||||| |||||| || | || | ||| |||||||||
Sbjct 1139884 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139943
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || |||||
Sbjct 1139944 AAGGTCTTGACGAAGATTTGCAT 1139966
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | |||||| || ||||||||
Sbjct 1139992 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1140051
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| ||
Sbjct 1140052 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1140111
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | || | ||||||| |||||| || | || | ||| |||||||||
Sbjct 1140112 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1140171
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || |||||
Sbjct 1140172 AAGGTCTTGACGAAGATTTGCAT 1140194
Score = 105 bits (116), Expect = 6e-18
Identities = 146/203 (72%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | |||||| || ||||||||
Sbjct 1139309 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139368
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| ||
Sbjct 1139369 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGG-GGAATGCCCTCCTTGTCCTGAATCTTG 1139427
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | || | ||||||| |||||| || | || | ||| |||||||||
Sbjct 1139428 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139487
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
| || || || || || |||||
Sbjct 1139488 AAGGTCTTGACGAAGATTTGCAT 1139510
>seq1
Length=554179
Score = 127 bits (140), Expect = 2e-24
Identities = 153/208 (74%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| ||||| |||||||| ||| || ||||| |||||||
Sbjct 255699 ACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGACCATCCTCG 255640
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| |||||||||| || || ||||| || ||||| |||||||||
Sbjct 255639 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCTTGG 255580
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||| || | |||| ||||| | ||||||||||| ||| | || |||
Sbjct 255579 ATCTTGGCTTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTG 255520
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCA 118737
|| || || || || || || || ||||
Sbjct 255519 CCCGTGAGGGTCTTGACGAAGATTTGCA 255492
>seq13
Length=1203898
Score = 100 bits (110), Expect = 2e-16
Identities = 137/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCG-CTCATAGTGCGCGTATCCT 118587
||||||||| | || ||||| || || |||||||| ||| ||| ||||| ||| |
Sbjct 755862 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTCGG-GTGCGACCATCTT 755804
Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||||||| || || ||| ||||||| || ||||| || || || ||||||||||||||
Sbjct 755803 CGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCT 755744
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
||| || || || | || | ||||||| |||||| || | || | ||| |
Sbjct 755743 GAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCT 755684
Query 118708 TGCCGGTCA 118716
|||||||||
Sbjct 755683 TGCCGGTCA 755675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830273104608
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