Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq23 131 1e-25 seq10 131 1e-25 seq1 127 2e-24 seq13 100 2e-16 >seq23 Length=1006473 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| ||||| |||||||||||| || |||||| ||||||| Sbjct 106611 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCG 106552 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| | || ||||| || || || ||||| ||||||||| Sbjct 106551 AGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 106492 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | ||||||||||| ||| | ||| ||| Sbjct 106491 ATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 106432 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || ||||| || || || || ||| || Sbjct 106431 CCCGTAAGAGTCTTGACGAAGATTTGCCTG 106402 >seq10 Length=1653987 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| ||||| ||||||||||| | || || |||||||||||| |||||| Sbjct 915094 GTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTCGAGCTGCTTTCCA 915153 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | ||||||||||| ||||| ||||| |||||||| ||| || || Sbjct 915154 GCGAAGATCAATCGCTGCTGATCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTG 915213 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||||| | |||||||||| || | ||| || ||||||| || Sbjct 915214 ACGTTGTCGATCGTGTCCGAGGATTCGACCTCGAGCGTGATCGTCTTACCGGTCAAGGTC 915273 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 915274 TTGACAAAGATCTGCAT 915290 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| ||||| ||||||||||| | || || ||||||||||||||| || Sbjct 915322 GTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTCGAGCTGTTTGCCC 915381 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || ||||||||||||| || ||||| || || ||||||||||| ||| || ||| Sbjct 915382 GCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGCTTTG 915441 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||||| ||||||||||| ||| | || ||||| || ||||| Sbjct 915442 ACATTGTCAATCGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTC 915501 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| || ||||| Sbjct 915502 TTGACAAAGATTTGCAT 915518 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||| ||| | |||||| || || Sbjct 1138162 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTC 1138221 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| ||||||| || ||||| ||||| || |||||||||||||| Sbjct 1138222 GAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTG 1138281 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || ||||| | || | ||||||| |||||| || | || | ||| || Sbjct 1138282 AATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTT 1138341 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || || || ||||| Sbjct 1138342 GCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| || |||||||| Sbjct 1138397 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1138456 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| || Sbjct 1138457 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1138516 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | || | ||||||| |||||| || | || | ||| ||||||||| Sbjct 1138517 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1138576 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||| Sbjct 1138577 AAGGTCTTGACGAAGATTTGCAT 1138599 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| || |||||||| Sbjct 1138625 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1138684 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| || Sbjct 1138685 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1138744 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | || | ||||||| |||||| || | || | ||| ||||||||| Sbjct 1138745 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1138804 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||| Sbjct 1138805 AAGGTCTTGACGAAGATTTGCAT 1138827 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| || |||||||| Sbjct 1138853 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1138912 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| || Sbjct 1138913 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1138972 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | || | ||||||| |||||| || | || | ||| ||||||||| Sbjct 1138973 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139032 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||| Sbjct 1139033 AAGGTCTTGACGAAGATTTGCAT 1139055 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| || |||||||| Sbjct 1139081 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139140 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| || Sbjct 1139141 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1139200 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | || | ||||||| |||||| || | || | ||| ||||||||| Sbjct 1139201 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139260 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||| Sbjct 1139261 AAGGTCTTGACGAAGATTTGCAT 1139283 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| || |||||||| Sbjct 1139536 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139595 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| || Sbjct 1139596 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1139655 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | || | ||||||| |||||| || | || | ||| ||||||||| Sbjct 1139656 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139715 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||| Sbjct 1139716 AAGGTCTTGACGAAGATTTGCAT 1139738 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| || |||||||| Sbjct 1139764 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139823 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| || Sbjct 1139824 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1139883 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | || | ||||||| |||||| || | || | ||| ||||||||| Sbjct 1139884 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139943 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||| Sbjct 1139944 AAGGTCTTGACGAAGATTTGCAT 1139966 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| || |||||||| Sbjct 1139992 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1140051 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| || Sbjct 1140052 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1140111 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | || | ||||||| |||||| || | || | ||| ||||||||| Sbjct 1140112 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1140171 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||| Sbjct 1140172 AAGGTCTTGACGAAGATTTGCAT 1140194 Score = 105 bits (116), Expect = 6e-18 Identities = 146/203 (72%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| || |||||||| Sbjct 1139309 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139368 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || ||| ||||||| || ||||| ||||| || |||||||||||||| ||| || Sbjct 1139369 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGG-GGAATGCCCTCCTTGTCCTGAATCTTG 1139427 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | || | ||||||| |||||| || | || | ||| ||||||||| Sbjct 1139428 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139487 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || ||||| Sbjct 1139488 AAGGTCTTGACGAAGATTTGCAT 1139510 >seq1 Length=554179 Score = 127 bits (140), Expect = 2e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| ||||| |||||||| ||| || ||||| ||||||| Sbjct 255699 ACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGACCATCCTCG 255640 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||||||||| || || ||||| || ||||| ||||||||| Sbjct 255639 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCTTGG 255580 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||| || | |||| ||||| | ||||||||||| ||| | || ||| Sbjct 255579 ATCTTGGCTTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTG 255520 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCA 118737 || || || || || || || || |||| Sbjct 255519 CCCGTGAGGGTCTTGACGAAGATTTGCA 255492 >seq13 Length=1203898 Score = 100 bits (110), Expect = 2e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCG-CTCATAGTGCGCGTATCCT 118587 ||||||||| | || ||||| || || |||||||| ||| ||| ||||| ||| | Sbjct 755862 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTCGG-GTGCGACCATCTT 755804 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||||||| || || ||| ||||||| || ||||| || || || |||||||||||||| Sbjct 755803 CGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCT 755744 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| || || || | || | ||||||| |||||| || | || | ||| | Sbjct 755743 GAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCT 755684 Query 118708 TGCCGGTCA 118716 ||||||||| Sbjct 755683 TGCCGGTCA 755675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830273104608