Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq10 118 7e-22
seq1 100 2e-16
seq13 96.9 2e-15
>seq10
Length=1653987
Score = 118 bits (130), Expect = 7e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
|||||| || || | ||||||| ||| | || || ||||| |||||||||||||
Sbjct 1138144 TCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1138203
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || |||| || | ||||||||| ||||| ||||| || ||||||||| |||
Sbjct 1138204 GAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGG 1138263
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 1138264 AATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1138323
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || |||||||| | || || || ||||| |||||
Sbjct 1138324 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371
Score = 114 bits (126), Expect = 8e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || || || | || || ||||| |||||||||||||
Sbjct 1139968 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1140027
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| ||||| || ||||||||| |||
Sbjct 1140028 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1140087
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 1140088 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1140147
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||| || || |||||||| | || || || ||||| ||||||
Sbjct 1140148 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATC 1140195
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || || || | || || ||||| |||||||||||||
Sbjct 1138373 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138432
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| ||||| || ||||||||| |||
Sbjct 1138433 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138492
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 1138493 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1138552
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || |||||||| | || || || ||||| |||||
Sbjct 1138553 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || || || | || || ||||| |||||||||||||
Sbjct 1138601 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138660
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| ||||| || ||||||||| |||
Sbjct 1138661 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138720
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 1138721 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1138780
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || |||||||| | || || || ||||| |||||
Sbjct 1138781 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || || || | || || ||||| |||||||||||||
Sbjct 1138829 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138888
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| ||||| || ||||||||| |||
Sbjct 1138889 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138948
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 1138949 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139008
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || |||||||| | || || || ||||| |||||
Sbjct 1139009 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || || || | || || ||||| |||||||||||||
Sbjct 1139057 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139116
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| ||||| || ||||||||| |||
Sbjct 1139117 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1139176
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 1139177 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139236
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || |||||||| | || || || ||||| |||||
Sbjct 1139237 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || || || | || || ||||| |||||||||||||
Sbjct 1139512 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139571
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| ||||| || ||||||||| |||
Sbjct 1139572 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1139631
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 1139632 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139691
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || |||||||| | || || || ||||| |||||
Sbjct 1139692 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || || || | || || ||||| |||||||||||||
Sbjct 1139740 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139799
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| ||||| || ||||||||| |||
Sbjct 1139800 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1139859
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 1139860 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139919
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || |||||||| | || || || ||||| |||||
Sbjct 1139920 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966
Score = 109 bits (120), Expect = 4e-19
Identities = 161/227 (71%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| || || || | || || ||||| |||||||||||||
Sbjct 1139285 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139344
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| ||||| ||||| || ||||||||| |||
Sbjct 1139345 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCG-GGGGA 1139403
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 1139404 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139463
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||| || || |||||||| | || || || ||||| |||||
Sbjct 1139464 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| || || |||||||| || | ||| |||| | || || | |||||| || |||||
Sbjct 915100 TCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTCGAGCTGCTTTCCAGCGAAG 915159
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| | |||||||| || || | || |||||||| ||||| ||| | | |
Sbjct 915160 ATCAATCGCTGCTGATCAGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTG 915219
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| |||| || | |||||||| || | |||||| || || ||||| | || || |||
Sbjct 915220 TCGATCGTGTCCGAGGATTCGACCTCGAGCGTGATCGTCTTACCGGTCAAGGTCTTGACA 915279
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 915280 AAGATCTGCAT 915290
>seq1
Length=554179
Score = 100 bits (110), Expect = 2e-16
Identities = 162/228 (71%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| |||||||| | || |||| ||| | || || || || ||||||||||||| |
Sbjct 255717 CCACCGCGCAGGCGAAGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 255658
Query 34223 -AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || || | || || | ||||||||| ||||| ||||| || || |||||| ||
Sbjct 255657 AAGGTG-CGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGG 255599
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
| || |||||||| ||| || ||||| | | | | |||| |||| || ||||
Sbjct 255598 GATGCCTTCCTTGTCTTGGATC-TTGGCTTTGACGTTGTCGATCGTGTCGGAAGACTCGA 255540
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCA 34388
| || | |||||||| ||||| ||||| || || || ||||| ||||
Sbjct 255539 CCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 255492
>seq13
Length=1203898
Score = 96.9 bits (106), Expect = 2e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG- 34220
|||||| || || | ||||||| ||| | || || ||||| |||||||||||||
Sbjct 755880 TCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 755821
Query 34221 ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280
| | || || | || || | ||||||||| ||||| ||||| || |||||||| ||
Sbjct 755820 TCGGGTG-CGACCATCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGG 755762
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| | || ||||||||| ||||| ||| | || | | |||| || | ||| ||||
Sbjct 755761 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 755702
Query 34341 CGTCCACCGTGATGGTTTTGCCGGT 34365
| || | ||| || || ||||||||
Sbjct 755701 CTTCAAGCGTAATCGTCTTGCCGGT 755677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071905501440
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