Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq10 120 2e-22 seq13 86.0 5e-12 >seq10 Length=1653987 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||||||| || |||| |||| || Sbjct 1138163 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCG 1138222 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| || | || || |||||||| || | |||||||||||| | Sbjct 1138223 AGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 1138282 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | ||||| ||| || || | |||||||||||| Sbjct 1138283 ATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTG 1138342 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| || ||||||||||| Sbjct 1138343 CCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || |||| |||| || || || Sbjct 1138397 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1138456 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | || || |||||||| || | |||||||||||| ||| || Sbjct 1138457 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1138516 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 |||||| | | ||||| ||| || || | |||||||||||||| ||| Sbjct 1138517 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1138576 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || ||||||||||| Sbjct 1138577 AAGGTCTTGACGAAGATTTGCAT 1138599 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || |||| |||| || || || Sbjct 1138625 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1138684 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | || || |||||||| || | |||||||||||| ||| || Sbjct 1138685 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1138744 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 |||||| | | ||||| ||| || || | |||||||||||||| ||| Sbjct 1138745 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1138804 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || ||||||||||| Sbjct 1138805 AAGGTCTTGACGAAGATTTGCAT 1138827 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || |||| |||| || || || Sbjct 1138853 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1138912 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | || || |||||||| || | |||||||||||| ||| || Sbjct 1138913 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1138972 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 |||||| | | ||||| ||| || || | |||||||||||||| ||| Sbjct 1138973 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139032 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || ||||||||||| Sbjct 1139033 AAGGTCTTGACGAAGATTTGCAT 1139055 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || |||| |||| || || || Sbjct 1139081 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139140 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | || || |||||||| || | |||||||||||| ||| || Sbjct 1139141 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1139200 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 |||||| | | ||||| ||| || || | |||||||||||||| ||| Sbjct 1139201 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139260 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || ||||||||||| Sbjct 1139261 AAGGTCTTGACGAAGATTTGCAT 1139283 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || |||| |||| || || || Sbjct 1139536 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139595 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | || || |||||||| || | |||||||||||| ||| || Sbjct 1139596 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1139655 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 |||||| | | ||||| ||| || || | |||||||||||||| ||| Sbjct 1139656 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139715 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || ||||||||||| Sbjct 1139716 AAGGTCTTGACGAAGATTTGCAT 1139738 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || |||| |||| || || || Sbjct 1139764 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139823 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | || || |||||||| || | |||||||||||| ||| || Sbjct 1139824 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1139883 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 |||||| | | ||||| ||| || || | |||||||||||||| ||| Sbjct 1139884 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139943 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || ||||||||||| Sbjct 1139944 AAGGTCTTGACGAAGATTTGCAT 1139966 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || |||| |||| || || || Sbjct 1139992 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1140051 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | || || |||||||| || | |||||||||||| ||| || Sbjct 1140052 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1140111 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 |||||| | | ||||| ||| || || | |||||||||||||| ||| Sbjct 1140112 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1140171 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || ||||||||||| Sbjct 1140172 AAGGTCTTGACGAAGATTTGCAT 1140194 Score = 105 bits (116), Expect = 5e-18 Identities = 146/203 (72%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| || |||| |||| || || || Sbjct 1139309 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGC 1139368 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | || || |||||||| || | |||||||||||| ||| || Sbjct 1139369 TTGCCGGCGAAGATGAGTCGTTGCTGGTCGGG-GGAATGCCCTCCTTGTCCTGAATCTTG 1139427 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 |||||| | | ||||| ||| || || | |||||||||||||| ||| Sbjct 1139428 GCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTC 1139487 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 | ||||| || ||||||||||| Sbjct 1139488 AAGGTCTTGACGAAGATTTGCAT 1139510 Score = 98.7 bits (108), Expect = 8e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||| || |||||||| || || || | || || || ||||| || || || Sbjct 915327 CTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAA 915386 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | |||||||||||||| || | ||||||||||||| ||| || |||| | Sbjct 915387 GATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTG-GCTTTGACAT 915445 Query 45265 CGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323 | || | ||||| ||| ||||| | ||| || ||||||||||| |||||||| | Sbjct 915446 TGTCAATCGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGA 915505 Query 45324 CAAAGATTTGCAT 45336 ||||||||||||| Sbjct 915506 CAAAGATTTGCAT 915518 >seq13 Length=1203898 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT-TCAGTTGGCGATCGTCGTC 45186 |||||||| || ||| ||||||||| |||||||||||| || | || ||| | || || Sbjct 755861 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTCGGGTG-CGACCATCTTC 755803 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || || |||||||| || | || || ||||| || || | |||||||||||| Sbjct 755802 GAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 755743 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||| || ||| || | | ||||| ||| || || | ||||||||||| Sbjct 755742 AATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTT 755683 Query 45307 GCCCGTCAGAGTCT 45320 ||| |||| |||| Sbjct 755682 GCCGGTCAAGGTCT 755669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075084440504