Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 2e-11 >seq10 Length=1653987 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | ||||||||| || || ||||| ||||||||||| || | | | || Sbjct 915307 AAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCC 915366 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||||| || | || | ||| ||||||||| ||||| || || ||||| Sbjct 915367 TCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC 915426 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGTAATGGT 15330 ||| ||| || ||| | || || || || | || || || || | ||| ||||| Sbjct 915427 TGAATCTTGGCTTTGACATTGTCAATCGTGTC-CGATGACTCGACCTCGAGGGTGATGGT 915485 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| || ||||| |||||||| Sbjct 915486 CTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || ||||||||||| || || || |||||||| ||| ||| | | ||||||| Sbjct 1138163 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCG 1138222 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | || ||||| ||| | || | ||||| |||||| ||||| || || ||||| | Sbjct 1138223 AGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 1138282 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | || || || || || || || | ||||| || || Sbjct 1138283 ATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTG 1138342 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| || || || || ||||||||| Sbjct 1138343 CCGGTCAAGGTCTTGACGAAGATTTGCATA 1138372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179094062584