Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq10 84.2 2e-11
>seq10
Length=1653987
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || | ||||||||| || || ||||| ||||||||||| || | | | ||
Sbjct 915307 AAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCC 915366
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | |||||||| || | || | ||| ||||||||| ||||| || || |||||
Sbjct 915367 TCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC 915426
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGTAATGGT 15330
||| ||| || ||| | || || || || | || || || || | ||| |||||
Sbjct 915427 TGAATCTTGGCTTTGACATTGTCAATCGTGTC-CGATGACTCGACCTCGAGGGTGATGGT 915485
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| || ||||| ||||||||
Sbjct 915486 CTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|| || ||||||||||| || || || |||||||| ||| ||| | | |||||||
Sbjct 1138163 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCG 1138222
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| || ||||| ||| | || | ||||| |||||| ||||| || || ||||| |
Sbjct 1138223 AGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 1138282
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
|| ||| ||| ||| | || || || || || || || | ||||| || ||
Sbjct 1138283 ATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTG 1138342
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| |||| || || || || |||||||||
Sbjct 1138343 CCGGTCAAGGTCTTGACGAAGATTTGCATA 1138372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362179094062584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |