Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq23 84.2 1e-11
>seq23
Length=1006473
Score = 84.2 bits (92), Expect = 1e-11
Identities = 149/216 (69%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
||||| || | |||||||| ||||| || |||||||| | |||| || | || ||
Sbjct 106611 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCG 106552
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCG 33277
| ||||| || || || || ||||||||||| | || |||||||| || || |
Sbjct 106551 AGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 106492
Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337
| | ||| || || | | ||||||||| | | || || || || |||||
Sbjct 106491 ATCTTGGCC---TTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 106435
Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373
|| ||||||||||| || ||||| |||||| || ||
Sbjct 106434 TTGCCCGTAAGAGTCTTGACGAAGATTTGCCTGATT 106399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777506757552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |