Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq23 84.2 1e-11 >seq23 Length=1006473 Score = 84.2 bits (92), Expect = 1e-11 Identities = 149/216 (69%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | |||||||| ||||| || |||||||| | |||| || | || || Sbjct 106611 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCG 106552 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCG 33277 | ||||| || || || || ||||||||||| | || |||||||| || || | Sbjct 106551 AGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 106492 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || | | ||||||||| | | || || || || ||||| Sbjct 106491 ATCTTGGCC---TTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 106435 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373 || ||||||||||| || ||||| |||||| || || Sbjct 106434 TTGCCCGTAAGAGTCTTGACGAAGATTTGCCTGATT 106399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777506757552