Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq2 93.3 3e-14
>seq2
Length=936589
Score = 93.3 bits (102), Expect = 3e-14
Identities = 156/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796
|| |||||| || || ||||| || || || || | | ||||||| ||||||||
Sbjct 266922 CAACTGATCGACGCCTTCCCCCGTATAATCGTCCTTCGCGGTCCTGTACTCGGCTCCGAA 266981
Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856
|| ||||||||||||||| || || || || | || || | || | |||| || ||
Sbjct 266982 ATGCCTCCACTGGAACCCATAAACGGGACCCAAATCGCCTTGCTCGCGATGCTTCAATCC 267041
Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916
||| ||||| || | || || ||||| | ||||| ||||| || || || |||||
Sbjct 267042 GAGCTTGTCCAAGAATTGCCTCGATCCATTCCCATCCCAAATCTTGACGCCATTGTCGGA 267101
Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962
| || || | || || |||| |||||||| |||| ||||
Sbjct 267102 CAAGAGGTTCGAATCCGTCGATCCTCGAACGAACCAGAGCAACTCC 267147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137500509752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |