Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 172 9e-39 seq7 158 2e-34 seq6 158 2e-34 >seq1 Length=554179 Score = 172 bits (190), Expect = 9e-39 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| |||||||| ||||| || ||||||||||| Sbjct 175306 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCACGTCGTGGTGGT 175365 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| || | |||||||||||||||||| Sbjct 175366 GTCAAGCGTATCTCCGGCCTCATCTACGAGGAGACGCGAGGCGTTTTGAAGATCTTCCTC 175425 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 175426 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 175485 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 175486 TCGCTCGATGTCGTCTACGC 175505 Score = 172 bits (190), Expect = 9e-39 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| |||||||| ||||| || ||||||||||| Sbjct 260086 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCACGTCGTGGTGGT 260027 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| || | |||||||||||||||||| Sbjct 260026 GTCAAGCGTATCTCCGGCCTCATCTACGAGGAGACGCGAGGCGTTTTGAAGATCTTCCTC 259967 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 259966 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 259907 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 259906 TCGCTCGATGTCGTCTACGC 259887 >seq7 Length=2982376 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 ||||| |||||||| || || ||||| || || ||||| ||||| || ||||||||||| Sbjct 1027628 CGAGACAACATCCAGGGCATTACCAAACCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1027569 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| || | ||| |||||||||||||| Sbjct 1027568 GTCAAGCGTATCTCCGGTCTCATCTACGAGGAGACGCGAGGTGTCTTGAAGATCTTCCTT 1027509 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||||||||| ||||| || || ||||| |||||| Sbjct 1027508 GAGAACGTCATCCGTGACTCGGTCACCTATACCGAACACGCCAAGCGCAAGACCGTCACC 1027449 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 1027448 TCGCTCGATGTCGTCTACGC 1027429 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 ||||| |||||||| || || ||||| || || ||||| ||||| || ||||||||||| Sbjct 1075058 CGAGACAACATCCAGGGCATTACCAAACCCGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1075117 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| || | ||| |||||||||||||| Sbjct 1075118 GTCAAGCGTATCTCCGGTCTCATCTACGAGGAGACGCGAGGTGTCTTGAAGATCTTCCTT 1075177 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||||||||| ||||| || || ||||| |||||| Sbjct 1075178 GAGAACGTCATCCGTGACTCGGTCACCTATACCGAACACGCCAAGCGCAAGACCGTCACC 1075237 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 1075238 TCGCTCGATGTCGTCTACGC 1075257 >seq6 Length=2534666 Score = 158 bits (174), Expect = 2e-34 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || ||||| || || ||||||||||| |||||||| ||||| || ||||||||||| Sbjct 2293510 CGCGACAACATTCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCACGTCGTGGTGGT 2293451 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| || | || ||||| ||||||||| Sbjct 2293450 GTCAAGCGTATCTCCGGCCTCATCTACGAGGAGACCCGAGGCGTCTTGAAAATCTTCCTC 2293391 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 2293390 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 2293331 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| ||||||| || Sbjct 2293330 TCGCTCGATGTCGTCTACGC 2293311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075178056632