Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq8 84.2 4e-11
>seq8
Length=1461820
Score = 84.2 bits (92), Expect = 4e-11
Identities = 205/309 (66%), Gaps = 4/309 (1%)
Strand=Plus/Minus
Query 193786 TCTATCAGGCATCTACCAGCGAACTGTATGGT--GGTGTTCTAGGCACTCCACTATCAGA 193843
||||||| || || ||| ||| ||| ||| ||| ||| || ||||| | ||| ||
Sbjct 1423761 TCTATCAAGCCTCGACCTCCGAGTTGTTTGGCAAGGTCTTCGAG--ACTCCTCAATCTGA 1423704
Query 193844 AACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGAT 193903
|| || || || || || || ||||| ||||| || |||||||| | | |||||
Sbjct 1423703 GGAGACGCCCTTCCACCCTCGTTCGCCTTACGGTGTCGCCAAGTTGTACGCGTTCTGGAT 1423644
Query 193904 CATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCA 193963
| ||||||| || || ||||| || | | |||| | ||||| |||||||| ||
Sbjct 1423643 CGTCAAGAACTACCGCGAGTCTTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCA 1423584
Query 193964 CGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAA 194023
||| || || | | || || || || || | ||||| | | || | | | |
Sbjct 1423583 CGAGTCCCCCCGTCGTGGCCGCACTTTCGTCACGAGGAAGATCTCGCGAGCTGTCGCCGA 1423524
Query 194024 GATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTG 194083
|||||| | || |||| | || || || ||||| || | || ||| | |||||
Sbjct 1423523 GATCTCGCTCGGCCAACAGGACTGCCTCTACCTCGGTAACCTGGAGGCCAAGCGTGATTG 1423464
Query 194084 GGGACACGC 194092
|||||||||
Sbjct 1423463 GGGACACGC 1423455
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807554957733440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |