Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 4e-11 >seq8 Length=1461820 Score = 84.2 bits (92), Expect = 4e-11 Identities = 205/309 (66%), Gaps = 4/309 (1%) Strand=Plus/Minus Query 193786 TCTATCAGGCATCTACCAGCGAACTGTATGGT--GGTGTTCTAGGCACTCCACTATCAGA 193843 ||||||| || || ||| ||| ||| ||| ||| ||| || ||||| | ||| || Sbjct 1423761 TCTATCAAGCCTCGACCTCCGAGTTGTTTGGCAAGGTCTTCGAG--ACTCCTCAATCTGA 1423704 Query 193844 AACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGAT 193903 || || || || || || || ||||| ||||| || |||||||| | | ||||| Sbjct 1423703 GGAGACGCCCTTCCACCCTCGTTCGCCTTACGGTGTCGCCAAGTTGTACGCGTTCTGGAT 1423644 Query 193904 CATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCA 193963 | ||||||| || || ||||| || | | |||| | ||||| |||||||| || Sbjct 1423643 CGTCAAGAACTACCGCGAGTCTTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCA 1423584 Query 193964 CGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAA 194023 ||| || || | | || || || || || | ||||| | | || | | | | Sbjct 1423583 CGAGTCCCCCCGTCGTGGCCGCACTTTCGTCACGAGGAAGATCTCGCGAGCTGTCGCCGA 1423524 Query 194024 GATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTG 194083 |||||| | || |||| | || || || ||||| || | || ||| | ||||| Sbjct 1423523 GATCTCGCTCGGCCAACAGGACTGCCTCTACCTCGGTAACCTGGAGGCCAAGCGTGATTG 1423464 Query 194084 GGGACACGC 194092 ||||||||| Sbjct 1423463 GGGACACGC 1423455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807554957733440