Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 203 8e-47
>seq2
Length=936589
Score = 203 bits (224), Expect = 8e-47
Identities = 509/770 (66%), Gaps = 10/770 (1%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||||| |||| || | | ||| || || || | | || ||| | || ||
Sbjct 3495 TTCACCCACGCCTCGCCGACGCTCTTCAACGCCGGTACGCCCCACCCGCAGCTCTCGTCG 3554
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| | | | ||||||||||| || ||||| || |||| || || || ||||
Sbjct 3555 TGCTTCTTGGTCACGATGAAGGACGACTCGATCGAAGGCATCTACGATACGCTCAAGACG 3614
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725
|| || || || ||||||| || || || || || | |||||||| | || ||
Sbjct 3615 TGCGCGCTCATCTCCAAGACCGCCGGTGGCATCGGCTTGAGCATCCACAACATCCGCGCG 3674
Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785
|| | || |||| ||| || || |||||||| || | || |||||||| ||
Sbjct 3675 ACCGGCTCGT-ACATCGCCGGGACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCG 3733
Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845
|| | |||| || || | ||||||||||| ||||| |||||| ||||| ||
Sbjct 3734 CGTCTACAACAACACCGCACGCTACGTCGACCAAGGTGGCAACAAGCGCCCCGGGGCTTT 3793
Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905
||| || || |||||||| || ||||| | |||||||| || || || || || ||
Sbjct 3794 TGCCATCTACCTCGAGCCGTGGCACGCCGACGTCTTTGAGTTCCTCGACCTTCGCAAGAA 3853
Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965
| || || |||||| | || || || ||||| |||| || || ||| | | || |
Sbjct 3854 CCACGGCAAGGAGGAAGTCCGCGCTCGCGATCTCTTCTTCGCGCTCTGGATCCCCGATCT 3913
Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025
|| ||| |||| || ||||| | | ||| | || || ||||| ||| ||
Sbjct 3914 CTTCATGGAGCGTGTCGAGGCCGCCGGTGACTGGCCCCTGTTCTGCCCCGCCGAGGCACC 3973
Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTC----TATACGAAAAGTATGAAT 364081
||||| ||| || | || || || ||| | | | | |||||||| ||
Sbjct 3974 GGGTCTCCACGAGGTCTATGGCGAGGA----GTTCCGCGTCTTGTTTGAAAAGTACGAGA 4029
Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141
|||||| || ||||| || ||||| || ||||| |||| || ||| | ||
Sbjct 4030 AGGAGGGCCGAGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATCCTCGAGG 4089
Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
| ||| | ||||| || | |||| ||| | ||||| || | ||| ||||| |
Sbjct 4090 CCCAGGTCGAGACCGGTAACCCCTTCATGCTCTACAAGGACGCCGCGAACAAGAAGTCGA 4149
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACA 364261
||||| || | || || || || || | |||| | || |||||||| || || |||
Sbjct 4150 ACCAGAAGAATCTCGGCACCATCAAGTCGTCCAACTTGTGCACCGAGATCATCGAGTACT 4209
Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311
| || ||||||||| ||||| || ||| | || ||||||||| | |||
Sbjct 4210 CGGCCCCCGACGAGTGCGCCGTTTGCAACTTGGCCTCGATCGCGTTGCCG 4259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353199218768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |