Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 203 8e-47 >seq2 Length=936589 Score = 203 bits (224), Expect = 8e-47 Identities = 509/770 (66%), Gaps = 10/770 (1%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| |||| || | | ||| || || || | | || ||| | || || Sbjct 3495 TTCACCCACGCCTCGCCGACGCTCTTCAACGCCGGTACGCCCCACCCGCAGCTCTCGTCG 3554 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | | ||||||||||| || ||||| || |||| || || || |||| Sbjct 3555 TGCTTCTTGGTCACGATGAAGGACGACTCGATCGAAGGCATCTACGATACGCTCAAGACG 3614 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 || || || || ||||||| || || || || || | |||||||| | || || Sbjct 3615 TGCGCGCTCATCTCCAAGACCGCCGGTGGCATCGGCTTGAGCATCCACAACATCCGCGCG 3674 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | || |||| ||| || || |||||||| || | || |||||||| || Sbjct 3675 ACCGGCTCGT-ACATCGCCGGGACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCG 3733 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 || | |||| || || | ||||||||||| ||||| |||||| ||||| || Sbjct 3734 CGTCTACAACAACACCGCACGCTACGTCGACCAAGGTGGCAACAAGCGCCCCGGGGCTTT 3793 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 ||| || || |||||||| || ||||| | |||||||| || || || || || || Sbjct 3794 TGCCATCTACCTCGAGCCGTGGCACGCCGACGTCTTTGAGTTCCTCGACCTTCGCAAGAA 3853 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | || || |||||| | || || || ||||| |||| || || ||| | | || | Sbjct 3854 CCACGGCAAGGAGGAAGTCCGCGCTCGCGATCTCTTCTTCGCGCTCTGGATCCCCGATCT 3913 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025 || ||| |||| || ||||| | | ||| | || || ||||| ||| || Sbjct 3914 CTTCATGGAGCGTGTCGAGGCCGCCGGTGACTGGCCCCTGTTCTGCCCCGCCGAGGCACC 3973 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTC----TATACGAAAAGTATGAAT 364081 ||||| ||| || | || || || ||| | | | | |||||||| || Sbjct 3974 GGGTCTCCACGAGGTCTATGGCGAGGA----GTTCCGCGTCTTGTTTGAAAAGTACGAGA 4029 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 |||||| || ||||| || ||||| || ||||| |||| || ||| | || Sbjct 4030 AGGAGGGCCGAGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATCCTCGAGG 4089 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | ||| | ||||| || | |||| ||| | ||||| || | ||| ||||| | Sbjct 4090 CCCAGGTCGAGACCGGTAACCCCTTCATGCTCTACAAGGACGCCGCGAACAAGAAGTCGA 4149 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACA 364261 ||||| || | || || || || || | |||| | || |||||||| || || ||| Sbjct 4150 ACCAGAAGAATCTCGGCACCATCAAGTCGTCCAACTTGTGCACCGAGATCATCGAGTACT 4209 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 | || ||||||||| ||||| || ||| | || ||||||||| | ||| Sbjct 4210 CGGCCCCCGACGAGTGCGCCGTTTGCAACTTGGCCTCGATCGCGTTGCCG 4259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353199218768