Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq10 113 4e-20 >seq10 Length=1653987 Score = 113 bits (124), Expect = 4e-20 Identities = 151/207 (73%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || || || ||||||| |||| || ||||| || Sbjct 915518 ATGCAAATCTTTGTCAAGACTCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCATCG 915459 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| || | ||| ||||| || || ||||| || ||| Sbjct 915458 GACACGATTGA--CAATGTCAAAGCCAAGATTCAG-GACAAGGAGGGTATTCCCCCCGAC 915402 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || ||||| |||||||| | || |||| || || | | |||||| Sbjct 915401 CAACAGCGTCTCATCTTTGCGGGCAAACAGCTCGAGGATGGCCGTACGCTTGCGGATTAC 915342 Query 25176 AATATTCAAAAAGAATCCACGCTACAT 25202 || || ||||| || || || || ||| Sbjct 915341 AACATCCAAAAGGAGTCGACCCTTCAT 915315 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||||||||| | ||||| |||| || || || || Sbjct 915290 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACGATCACGCTCGAGGTCGAATCCTCG 915231 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| | || || | ||| ||||| ||||| || || ||||| Sbjct 915230 GACACGATCGACAACGTCA---AGGCCAAGATTCA-GGACAAGGAAGGCATCCCTCCTGA 915175 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| | || || || || || || | || |||| || || | | ||||| Sbjct 915174 TCAGCAGCGATTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACGCTTGCGGATTA 915115 Query 25175 CAATATTCAAAAAGAATCCACGCTACAT 25202 ||| || ||||| || || || || ||| Sbjct 915114 CAACATCCAAAAGGAGTCGACCCTTCAT 915087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327873251560