Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq10 113 4e-20
>seq10
Length=1653987
Score = 113 bits (124), Expect = 4e-20
Identities = 151/207 (73%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| |||||| | || || || ||||||| |||| || ||||| ||
Sbjct 915518 ATGCAAATCTTTGTCAAGACTCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCATCG 915459
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || |||| || | ||| ||||| || || ||||| || |||
Sbjct 915458 GACACGATTGA--CAATGTCAAAGCCAAGATTCAG-GACAAGGAGGGTATTCCCCCCGAC 915402
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| | || ||||| |||||||| | || |||| || || | | ||||||
Sbjct 915401 CAACAGCGTCTCATCTTTGCGGGCAAACAGCTCGAGGATGGCCGTACGCTTGCGGATTAC 915342
Query 25176 AATATTCAAAAAGAATCCACGCTACAT 25202
|| || ||||| || || || || |||
Sbjct 915341 AACATCCAAAAGGAGTCGACCCTTCAT 915315
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/208 (71%), Gaps = 8/208 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| ||||||||||| | ||||| |||| || || || ||
Sbjct 915290 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACGATCACGCTCGAGGTCGAATCCTCG 915231
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| | || || | ||| ||||| ||||| || || |||||
Sbjct 915230 GACACGATCGACAACGTCA---AGGCCAAGATTCA-GGACAAGGAAGGCATCCCTCCTGA 915175
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| ||||| | || || || || || || | || |||| || || | | |||||
Sbjct 915174 TCAGCAGCGATTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACGCTTGCGGATTA 915115
Query 25175 CAATATTCAAAAAGAATCCACGCTACAT 25202
||| || ||||| || || || || |||
Sbjct 915114 CAACATCCAAAAGGAGTCGACCCTTCAT 915087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327873251560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |