Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq10 149 5e-31 seq1 122 7e-23 seq23 104 2e-17 seq13 102 7e-17 >seq10 Length=1653987 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 |||||||||| ||||| || ||| | || || || || |||| || || || || | Sbjct 915520 AGATGCAAATCTTTGTCAAGACTCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCAT 915461 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| || ||||| || ||||| ||||||||||||||||| ||||| | Sbjct 915460 CGGACACGATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACC 915401 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 |||| ||||| || ||||| ||||||||| | |||||| ||| || | | ||||||| Sbjct 915400 AACAGCGTCTCATCTTTGCGGGCAAACAGCTCGAGGATGGCCGTACGCTTGCGGATTACA 915341 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| ||||| || || ||| | ||| | || ||||| |||| || ||| Sbjct 915340 ACATCCAAAAGGAGTCGACCCTTCATCTCGTCTTGCGCCTGCGTGGTGGT 915291 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 |||||||||| || || || || || ||||| || ||| | || |||||||| || | Sbjct 1140196 AGATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGT 1140137 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || || | ||| || | || || ||||| ||||||||||| ||||| ||||| | Sbjct 1140136 CGGACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACC 1140077 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | ||||| || || || |||||||| ||| | || || ||||| || |||| |||| Sbjct 1140076 AGCAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACA 1140017 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || || || || | ||| | || |||| |||| || ||| Sbjct 1140016 ACATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139967 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| | || |||||||| || | | Sbjct 1138371 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138312 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| ||||| || Sbjct 1138311 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138252 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | || || ||||| || |||| |||||| Sbjct 1138251 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138192 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || || |||||| | || || || Sbjct 1138191 ATCCAGAAGGAGTCCACCCTTCACTTGGT 1138163 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || |||||||| ||| |||| || || || ||| || | Sbjct 915290 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACGATCACGCTCGAGGTCGAATCCTCG 915231 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| |||||||| || || || || ||||| Sbjct 915230 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGATCAG 915171 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || || ||| | |||||| ||| || | | ||||||||| Sbjct 915170 CAGCGATTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACGCTTGCGGATTACAAC 915111 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || || ||| | ||| | || ||||| |||| || ||| Sbjct 915110 ATCCAAAAGGAGTCGACCCTTCATCTCGTCTTGCGCCTGCGTGGTGGT 915063 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| | || |||||||| || | | Sbjct 1138599 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138540 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| ||||| || Sbjct 1138539 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138480 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | || || ||||| || |||| |||||| Sbjct 1138479 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138420 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | || |||| |||| || ||| Sbjct 1138419 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1138372 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| | || |||||||| || | | Sbjct 1138827 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138768 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| ||||| || Sbjct 1138767 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138708 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | || || ||||| || |||| |||||| Sbjct 1138707 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138648 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | || |||| |||| || ||| Sbjct 1138647 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1138600 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| | || |||||||| || | | Sbjct 1139055 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138996 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| ||||| || Sbjct 1138995 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138936 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | || || ||||| || |||| |||||| Sbjct 1138935 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138876 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | || |||| |||| || ||| Sbjct 1138875 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1138828 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| | || |||||||| || | | Sbjct 1139283 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139224 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| ||||| || Sbjct 1139223 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1139164 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | || || ||||| || |||| |||||| Sbjct 1139163 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139104 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | || |||| |||| || ||| Sbjct 1139103 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139056 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| | || |||||||| || | | Sbjct 1139738 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139679 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| ||||| || Sbjct 1139678 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1139619 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | || || ||||| || |||| |||||| Sbjct 1139618 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139559 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | || |||| |||| || ||| Sbjct 1139558 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139511 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| | || |||||||| || | | Sbjct 1139966 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139907 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| ||||| || Sbjct 1139906 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1139847 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | || || ||||| || |||| |||||| Sbjct 1139846 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139787 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | || |||| |||| || ||| Sbjct 1139786 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139739 Score = 111 bits (122), Expect = 1e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || ||||| || ||| | || |||||||| || | | Sbjct 1139510 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139451 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| ||||||||||| ||||| ||||| || Sbjct 1139450 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCC-CCCGACCAG 1139392 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || |||||||| ||| | || || ||||| || |||| |||||| Sbjct 1139391 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139332 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | || |||| |||| || ||| Sbjct 1139331 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139284 >seq1 Length=554179 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279 ||||||| || || || || | || || || || |||| || || || || | ||| Sbjct 255492 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCCG 255551 Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339 | || | ||| | ||||| || || ||||||||||| || || || ||||| |||| Sbjct 255552 ACACGATCGACAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAAC 255611 Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399 ||||||| || || |||||||| ||| | |||||| |||||| | |||| ||||||| Sbjct 255612 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACCTTGGCCGACTACAACA 255671 Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 | ||||| || || ||| | || || || | || ||||||| ||| Sbjct 255672 TCCAAAAGGAGTCGACCCTTCACTTGGTCCTTCGCCTGCGCGGTGGT 255718 >seq23 Length=1006473 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280 |||||| || || || ||| | || || || ||| |||| || || || || | |||| Sbjct 106405 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 106464 Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340 || | ||| | |||| || || ||||||||||| || || || || || || || Sbjct 106465 CACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 106524 Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400 ||| | || || |||||||| ||| | |||||| |||||| | ||||||||||||| Sbjct 106525 ACGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTTTGGCCGATTACAACAT 106584 Query 22401 TCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || || ||| | || || || Sbjct 106585 CCAAAAGGAGTCGACCCTCCACTTGGT 106611 >seq13 Length=1203898 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22237 ACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATC 22296 || || ||||| || ||| | || |||||||| || | | || || | ||| || || Sbjct 755671 ACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGACACGATTGACAATGTC 755730 Query 22297 AAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCC 22356 || || ||||| ||||||||||| ||||| || || || ||||| || || || ||| Sbjct 755731 AAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAACGACTCATCTTCGCC 755790 Query 22357 GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||||| ||| | || ||| |||||| |||| |||||||| || || || |||||| Sbjct 755791 GGCAAGCAGCTCGAAGATGGTCGCACCCGAGCCGACTACAACATCCAGAAGGAGTCCACC 755850 Query 22417 ATACATTTAGT 22427 | || || || Sbjct 755851 CTTCACTTGGT 755861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727877229560