Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq10 149 5e-31
seq1 122 7e-23
seq23 104 2e-17
seq13 102 7e-17
>seq10
Length=1653987
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| ||||| || ||| | || || || || |||| || || || || |
Sbjct 915520 AGATGCAAATCTTTGTCAAGACTCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCAT 915461
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| || ||||| || ||||| ||||||||||||||||| ||||| |
Sbjct 915460 CGGACACGATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACC 915401
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
|||| ||||| || ||||| ||||||||| | |||||| ||| || | | |||||||
Sbjct 915400 AACAGCGTCTCATCTTTGCGGGCAAACAGCTCGAGGATGGCCGTACGCTTGCGGATTACA 915341
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||| ||||| || || ||| | ||| | || ||||| |||| || |||
Sbjct 915340 ACATCCAAAAGGAGTCGACCCTTCATCTCGTCTTGCGCCTGCGTGGTGGT 915291
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||||||| || || || || || ||||| || ||| | || |||||||| || |
Sbjct 1140196 AGATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGT 1140137
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || || | ||| || | || || ||||| ||||||||||| ||||| ||||| |
Sbjct 1140136 CGGACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACC 1140077
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| ||||| || || || |||||||| ||| | || || ||||| || |||| ||||
Sbjct 1140076 AGCAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACA 1140017
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||| || || || || || | ||| | || |||| |||| || |||
Sbjct 1140016 ACATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139967
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || ||||| || ||| | || |||||||| || | |
Sbjct 1138371 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138312
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1138311 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138252
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || || || |||||||| ||| | || || ||||| || |||| ||||||
Sbjct 1138251 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138192
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || |||||| | || || ||
Sbjct 1138191 ATCCAGAAGGAGTCCACCCTTCACTTGGT 1138163
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || |||||||| ||| |||| || || || ||| || |
Sbjct 915290 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACGATCACGCTCGAGGTCGAATCCTCG 915231
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || ||||| |||||||| || || || || |||||
Sbjct 915230 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGATCAG 915171
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || || ||| | |||||| ||| || | | |||||||||
Sbjct 915170 CAGCGATTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACGCTTGCGGATTACAAC 915111
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| || || ||| | ||| | || ||||| |||| || |||
Sbjct 915110 ATCCAAAAGGAGTCGACCCTTCATCTCGTCTTGCGCCTGCGTGGTGGT 915063
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || ||||| || ||| | || |||||||| || | |
Sbjct 1138599 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138540
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1138539 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138480
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || || || |||||||| ||| | || || ||||| || |||| ||||||
Sbjct 1138479 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138420
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||| | || |||| |||| || |||
Sbjct 1138419 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1138372
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || ||||| || ||| | || |||||||| || | |
Sbjct 1138827 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138768
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1138767 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138708
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || || || |||||||| ||| | || || ||||| || |||| ||||||
Sbjct 1138707 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138648
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||| | || |||| |||| || |||
Sbjct 1138647 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1138600
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || ||||| || ||| | || |||||||| || | |
Sbjct 1139055 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138996
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1138995 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138936
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || || || |||||||| ||| | || || ||||| || |||| ||||||
Sbjct 1138935 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138876
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||| | || |||| |||| || |||
Sbjct 1138875 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1138828
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || ||||| || ||| | || |||||||| || | |
Sbjct 1139283 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139224
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1139223 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1139164
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || || || |||||||| ||| | || || ||||| || |||| ||||||
Sbjct 1139163 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139104
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||| | || |||| |||| || |||
Sbjct 1139103 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139056
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || ||||| || ||| | || |||||||| || | |
Sbjct 1139738 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139679
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1139678 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1139619
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || || || |||||||| ||| | || || ||||| || |||| ||||||
Sbjct 1139618 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139559
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||| | || |||| |||| || |||
Sbjct 1139558 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139511
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || ||||| || ||| | || |||||||| || | |
Sbjct 1139966 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139907
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1139906 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1139847
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || || || |||||||| ||| | || || ||||| || |||| ||||||
Sbjct 1139846 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139787
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||| | || |||| |||| || |||
Sbjct 1139786 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139739
Score = 111 bits (122), Expect = 1e-19
Identities = 162/228 (71%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || || || ||||| || ||| | || |||||||| || | |
Sbjct 1139510 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139451
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 1139450 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCC-CCCGACCAG 1139392
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| || || || |||||||| ||| | || || ||||| || |||| ||||||
Sbjct 1139391 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139332
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||| | || |||| |||| || |||
Sbjct 1139331 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGT 1139284
>seq1
Length=554179
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279
||||||| || || || || | || || || || |||| || || || || | |||
Sbjct 255492 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCCG 255551
Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339
| || | ||| | ||||| || || ||||||||||| || || || ||||| ||||
Sbjct 255552 ACACGATCGACAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAAC 255611
Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399
||||||| || || |||||||| ||| | |||||| |||||| | |||| |||||||
Sbjct 255612 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACCTTGGCCGACTACAACA 255671
Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| ||||| || || ||| | || || || | || ||||||| |||
Sbjct 255672 TCCAAAAGGAGTCGACCCTTCACTTGGTCCTTCGCCTGCGCGGTGGT 255718
>seq23
Length=1006473
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 22221 GCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGA 22280
|||||| || || || ||| | || || || ||| |||| || || || || | ||||
Sbjct 106405 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 106464
Query 22281 TACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACA 22340
|| | ||| | |||| || || ||||||||||| || || || || || || ||
Sbjct 106465 CACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 106524
Query 22341 ACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACAT 22400
||| | || || |||||||| ||| | |||||| |||||| | |||||||||||||
Sbjct 106525 ACGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTTTGGCCGATTACAACAT 106584
Query 22401 TCAAAAAGAATCCACCATACATTTAGT 22427
||||| || || ||| | || || ||
Sbjct 106585 CCAAAAGGAGTCGACCCTCCACTTGGT 106611
>seq13
Length=1203898
Score = 102 bits (112), Expect = 7e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 22237 ACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATC 22296
|| || ||||| || ||| | || |||||||| || | | || || | ||| || ||
Sbjct 755671 ACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGACACGATTGACAATGTC 755730
Query 22297 AAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCC 22356
|| || ||||| ||||||||||| ||||| || || || ||||| || || || |||
Sbjct 755731 AAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAACGACTCATCTTCGCC 755790
Query 22357 GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||||| ||| | || ||| |||||| |||| |||||||| || || || ||||||
Sbjct 755791 GGCAAGCAGCTCGAAGATGGTCGCACCCGAGCCGACTACAACATCCAGAAGGAGTCCACC 755850
Query 22417 ATACATTTAGT 22427
| || || ||
Sbjct 755851 CTTCACTTGGT 755861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727877229560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |