Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq10 122 7e-23
seq23 87.8 2e-12
>seq10
Length=1653987
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || | ||| | || || || ||||| |||||||||||
Sbjct 915289 ATACCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCC 915348
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| ||| || || ||||| || || ||||||||||||||||||| ||
Sbjct 915349 GCAAGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGG 915408
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || ||||| |||||| ||| | | |||| ||||| | || |||
Sbjct 915409 GGAATACCCTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCG 915468
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || ||||| || ||||| || ||||| || |||||
Sbjct 915469 ACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | ||| || | ||| | || || || ||||| |||||||||||
Sbjct 915063 ACCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGC 915122
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| ||||| ||| || || || || |||||| |||| | ||||| || || |||||
Sbjct 915123 AAGCGTACGGCCATCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGG 915182
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|||||||| ||||| |||||| || | | || | ||||| | |||||||||
Sbjct 915183 GATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGATTCGAC 915242
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | ||| || ||||||| || || ||||| ||||||||
Sbjct 915243 CTCGAGCGTGATCGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290
>seq23
Length=1006473
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || | | || || || | || || || ||||| ||||||||||||
Sbjct 106632 ATACCACCTCGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCG 106573
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||| || ||| || || || || || ||| |||| | || || ||||| ||
Sbjct 106572 GCCAAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGC 106513
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| |||||||| ||||| ||||| || | | || | ||||||| || |||
Sbjct 106512 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCG 106453
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | ||| ||||| || ||||| || || || || ||| ||
Sbjct 106452 ACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGCCTG 106402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134277110688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |