Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq2 360 4e-94
seq6 84.2 4e-11
>seq2
Length=936589
Score = 360 bits (398), Expect = 4e-94
Identities = 869/1299 (67%), Gaps = 40/1299 (3%)
Strand=Plus/Minus
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|||| || |||| ||||||||||||||||||| |||||| | | ||| |||| |
Sbjct 4522 TCGATCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGAGCCTCGGGC 4463
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
|| ||| || || ||| |||||| ||||||||| || ||||| |||||||||
Sbjct 4462 GAGTCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCCAACCCTTGCACTCCGATGCCG 4403
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||| || ||||||| || ||| |||||||| ||||| |||||
Sbjct 4402 ATGGGACGGTGGCGGAAGTTGGAGTTTTGCGCCTCGATGACGGGGTAGTAGTTGACGTCG 4343
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | ||| | |||| | || | | |||| ||| |||| || |||||
Sbjct 4342 ATGATGCGGTTCAAGTTGAACGCGACGACCTTGGCGACCTCGTGCAGCTTCTTGAAGTCA 4283
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
||| || | | || || ||| ||| ||| || | ||| ||||
Sbjct 4282 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 4241
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| |||||| ||||| ||| || | | | ||||| || ||||||||||| | |||
Sbjct 4240 AAGTTGCAAACGGCGCACTCGTCGGGGGCCGAGTACTCGATGATCTCGGTGCACAAGTTG 4181
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810
||||||||||||| || | || || || ||||| ||| |||||||||||||
Sbjct 4180 GACGACTTGATGGTGCCGAGATTCTTCTGGTTCGACTTCTTGTTCGCGGCGTCCTTGTAG 4121
Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCT 244869
||||||||||| |||||||||| |||||| |||||| ||| || ||| || |
Sbjct 4120 AGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGGATCGC-GTACCAAAGCTTTTG 4062
Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929
|| || |||| | || |||||| |||||| ||| | | |||
Sbjct 4061 CGCGGGGATCGTCTTCTTGGCTCGGCCCTCCTTCTCGTACTTTTCAAACAAGACGCGGAA 4002
Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989
||| ||| ||||||||| || || || | || ||||| | || ||| ||
Sbjct 4001 CTCCTCGCCATAGACCTCGTGGAGACCCGGTGCCTCGGCGGGGCAGAACAGGGGCCAGTC 3942
Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049
||| || ||| ||| | || ||||||||| |||||||||||||| || |||||| ||
Sbjct 3941 ACCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGGATCCAGAGCGCGAAGAAGAGATC 3882
Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109
| | | || ||| ||| |||||| | || || | || |||||||||||
Sbjct 3881 GCGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTCAAAGACGTC 3822
Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169
| ||||||| ||||| | ||||| || | || ||||| ||||||||||| || |||||
Sbjct 3821 GGCGTGCCACGGCTCGAGGTAGATGGCAAAAGCCCCGGGGCGCTTGTTGCCACCTTGGTC 3762
Query 245170 CACCATCCTCTCGAGCGC----GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225
|| | || ||| |||| ||| ||| || | || || |||||||| ||||
Sbjct 3761 GACG----TAGCGTGCGGTGTTGTTGTAGACGCGGAGCATGGGGACGATGCCGTTCGAGT 3706
Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTA 245285
|||||| || || |||||| | ||| | | | || |||| |||| || ||| |
Sbjct 3705 AGCCGTTCGTCCCGGCGATGTACGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAGCCGA 3646
Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345
|| |||||| |||||||||||| ||||| |||||| || || ||||| || |
Sbjct 3645 TGCCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTATCGTAGATGCCTTCGA 3586
Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405
| ||| |||||| ||| || ||||| || || ||||| || | ||| | | |
Sbjct 3585 TCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGGGGCGTACCGG 3526
Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTC 245464
|||||| || || || ||||||||| ||||||| |||| || | || ||||| |
Sbjct 3525 CGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGC-GCTCGGACATGAGGTTGTACGAC 3467
Query 245465 TGGAGCA-GAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTG 245523
|| || | | || ||||||| | | |||||| | |||| | |||||| ||||
Sbjct 3466 TGCAGGACGCGC-TCGATGTCATGACTGTGGATGCCGACGGCGACACGCATGAGCATGTG 3408
Query 245524 CTG-GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGT 245580
|| |||||| ||| | || | ||| | |||| |||||||||||| |||||
Sbjct 3407 TTGCGGGCGT-TCG--GCAACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCAAGCGT 3351
Query 245581 CTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCT 245640
|||||| |||||||| |||||||||||| || || |||| || || ||| |
Sbjct 3350 CTTGAAGCCAAAGTAGTTGTAGCCAAAGTCACGGTCGTAGATGACCGCGCTGTTGAGGCG 3291
Query 245641 CTCGGCG-TGCTTCTGACTGACCTCGTAAAACTTTTGCG 245678
|||||| || ||| |||||||||| || |||||
Sbjct 3290 GTCGGCGTTGGCCATGA-TGACCTCGTACGTCTCTTGCG 3253
Score = 154 bits (170), Expect = 3e-32
Identities = 192/260 (74%), Gaps = 5/260 (2%)
Strand=Plus/Minus
Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803
||| | ||||| |||||||||||||||||| || | | |||||||||| | ||||||
Sbjct 55400 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGAGGCTTGATGCCCGGATTGACCTTC 55341
Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863
|| ||||| |||||| | |||||||| || || | |||||||||||||||||||||
Sbjct 55340 TCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGCCTCCTGTTC 55281
Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922
|| ||||||| || ||| |||| || ||| |||||||| ||||||
Sbjct 55280 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCCCTCATCATCAAGGAGGC 55225
Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAA 42982
||| |||||||||||||||||| | || || | || ||| || ||||||||||
Sbjct 55224 CGTCGAGATCGAGAAGGAGTTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCATGAA 55165
Query 42983 CCACGACCTCATGTGCAAGT 43002
| | | ||||||||| |||
Sbjct 55164 CGCCAAGCTCATGTGCCAGT 55145
>seq6
Length=2534666
Score = 84.2 bits (92), Expect = 4e-11
Identities = 97/128 (76%), Gaps = 2/128 (2%)
Strand=Plus/Minus
Query 42737 CTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGAC 42795
|| ||| || ||||||||||||||||||||||||| | |||| || ||||||||||
Sbjct 1721696 CTCCTCAGGTTCCTTCGCCTCCATCTTCTGGCTCAAAAAACGAGGTCTC-ATGCCCGGAC 1721638
Query 42796 TCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCC 42855
| |||||| ||||||||||| | | ||||| || || |||| || || ||| ||
Sbjct 1721637 TGTGCTTCTCCAACGAACTCATATCCCGCGACGAAGGCCTTCATACCGAATTCGCCGTCC 1721578
Query 42856 TCCTGTTC 42863
| || |||
Sbjct 1721577 TTCTTTTC 1721570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338916698240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |