Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq10 84.2 2e-11
>seq10
Length=1653987
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || ||||| ||||| ||||||||| |||||||| || ||
Sbjct 1138372 ACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1138431
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| | || || |||| || | ||||||||||| || || || || ||||| || |
Sbjct 1138432 GAGAGTG-CGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGG 1138490
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAA---TGGAACTCACACTATCAGTAGATT 34075
| | || ||| |||||| ||| || ||||| || | || | || | || |
Sbjct 1138491 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATC---GTGTCCGACGACT 1138547
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| ||| | ||| || || || ||||| | || || || |||||||||||
Sbjct 1138548 CGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || ||||| ||||| ||||||||| |||||||| || ||
Sbjct 1138600 ACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1138659
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| | || || |||| || | ||||||||||| || || || || ||||| || |
Sbjct 1138660 GAGAGTG-CGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGG 1138718
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAA---TGGAACTCACACTATCAGTAGATT 34075
| | || ||| |||||| ||| || ||||| || | || | || | || |
Sbjct 1138719 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATC---GTGTCCGACGACT 1138775
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| ||| | ||| || || || ||||| | || || || |||||||||||
Sbjct 1138776 CGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || ||||| ||||| ||||||||| |||||||| || ||
Sbjct 1138828 ACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1138887
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| | || || |||| || | ||||||||||| || || || || ||||| || |
Sbjct 1138888 GAGAGTG-CGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGG 1138946
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAA---TGGAACTCACACTATCAGTAGATT 34075
| | || ||| |||||| ||| || ||||| || | || | || | || |
Sbjct 1138947 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATC---GTGTCCGACGACT 1139003
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| ||| | ||| || || || ||||| | || || || |||||||||||
Sbjct 1139004 CGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || ||||| ||||| ||||||||| |||||||| || ||
Sbjct 1139056 ACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1139115
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| | || || |||| || | ||||||||||| || || || || ||||| || |
Sbjct 1139116 GAGAGTG-CGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGG 1139174
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAA---TGGAACTCACACTATCAGTAGATT 34075
| | || ||| |||||| ||| || ||||| || | || | || | || |
Sbjct 1139175 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATC---GTGTCCGACGACT 1139231
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| ||| | ||| || || || ||||| | || || || |||||||||||
Sbjct 1139232 CGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || ||||| ||||| ||||||||| |||||||| || ||
Sbjct 1139511 ACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1139570
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| | || || |||| || | ||||||||||| || || || || ||||| || |
Sbjct 1139571 GAGAGTG-CGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGG 1139629
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAA---TGGAACTCACACTATCAGTAGATT 34075
| | || ||| |||||| ||| || ||||| || | || | || | || |
Sbjct 1139630 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATC---GTGTCCGACGACT 1139686
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| ||| | ||| || || || ||||| | || || || |||||||||||
Sbjct 1139687 CGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || ||||| ||||| ||||||||| |||||||| || ||
Sbjct 1139739 ACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1139798
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| | || || |||| || | ||||||||||| || || || || ||||| || |
Sbjct 1139799 GAGAGTG-CGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGG 1139857
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAA---TGGAACTCACACTATCAGTAGATT 34075
| | || ||| |||||| ||| || ||||| || | || | || | || |
Sbjct 1139858 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATC---GTGTCCGACGACT 1139914
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| ||| | ||| || || || ||||| | || || || |||||||||||
Sbjct 1139915 CGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| || | ||| ||||| || ||||| ||||| ||||||||| |||||||| || ||
Sbjct 1139967 ACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1140026
Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
| | || || |||| || | ||||||||||| || || || || ||||| || |
Sbjct 1140027 GAGAGTG-CGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGG 1140085
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAA---TGGAACTCACACTATCAGTAGATT 34075
| | || ||| |||||| ||| || ||||| || | || | || | || |
Sbjct 1140086 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATC---GTGTCCGACGACT 1140142
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| ||| | ||| || || || ||||| | || || || |||||||||||
Sbjct 1140143 CGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| |||| || || ||||||| ||||| ||| ||||||||| |||||||| || ||
Sbjct 1138145 CCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1138204
Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
| | || || |||| || | ||||||||||| || || || || ||||| || ||
Sbjct 1138205 AGAGTG-CGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGG 1138263
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAA---TGGAACTCACACTATCAGTAGATTC 34076
| || ||| |||||| ||| || ||||| || | || | || | || ||
Sbjct 1138264 AATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATC---GTGTCCGACGACTC 1138320
Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
| ||| | ||| || || || ||||| | || || || |||||||||||
Sbjct 1138321 GACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062283859248
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |