Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq10 140 8e-28 seq1 123 6e-23 seq23 113 1e-19 seq2 91.5 3e-13 >seq10 Length=1653987 Score = 140 bits (154), Expect = 8e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | | |||||||||| || || |||||||| || || || Sbjct 915061 TGACCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCC 915120 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || ||||| || || || || | || ||||| |||||||||| ||||| ||| | Sbjct 915121 GCAAGCGTACGGCCATCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGA 915180 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| ||||| || ||||| || || || || ||||| || || | || ||||| Sbjct 915181 GGGATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGATTCG 915240 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| ||||||| |||||||| || |||||||| Sbjct 915241 ACCTCGAGCGTGATCGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290 Score = 129 bits (142), Expect = 1e-24 Identities = 169/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 ||||| || ||||| | ||| || | |||| ||| || || ||||| || |||||| Sbjct 1138142 TGTCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 1138201 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 ||||| ||||| |||||||| | || || || |||||||| || || || || || Sbjct 1138202 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCG 1138258 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || || ||||| || || || || || || || || | || ||| Sbjct 1138259 GGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGAC 1138318 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct 1138319 TCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Score = 129 bits (142), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 1139285 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139344 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || || || || || ||| Sbjct 1139345 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1139401 Query 288367 --ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTA 288424 || || || || ||||| || || || || || || || || | || ||| || | Sbjct 1139402 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGA 1139461 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||| ||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct 1139462 CTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 1138373 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138432 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || || || || || ||| Sbjct 1138433 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1138489 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || || || || || | || ||| || Sbjct 1138490 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1138549 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct 1138550 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 1138601 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138660 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || || || || || ||| Sbjct 1138661 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1138717 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || || || || || | || ||| || Sbjct 1138718 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1138777 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct 1138778 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 1138829 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138888 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || || || || || ||| Sbjct 1138889 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1138945 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || || || || || | || ||| || Sbjct 1138946 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139005 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct 1139006 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 1139057 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139116 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || || || || || ||| Sbjct 1139117 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1139173 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || || || || || | || ||| || Sbjct 1139174 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139233 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct 1139234 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 1139512 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139571 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || || || || || ||| Sbjct 1139572 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1139628 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || || || || || | || ||| || Sbjct 1139629 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139688 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct 1139689 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 1139740 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139799 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || || || || || ||| Sbjct 1139800 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1139856 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || || || || || | || ||| || Sbjct 1139857 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139916 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct 1139917 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 1139968 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1140027 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| || || || || || ||| Sbjct 1140028 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1140084 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || || || || || || || | || ||| || Sbjct 1140085 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1140144 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| ||||||| ||||||||||| || ||||| Sbjct 1140145 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | | |||||||||| || || |||||||| || || || || Sbjct 915292 CCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCA 915351 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || || || | ||||| || || ||||| ||||||||||| || ||| Sbjct 915352 AGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTG---GTCGGGG 915408 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || ||||| || || || || | || || || Sbjct 915409 GGAATACCCTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCG 915468 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || ||||||||||| || || ||||| Sbjct 915469 ACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 >seq1 Length=554179 Score = 123 bits (136), Expect = 6e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | |||| || || |||||||| || |||||||| Sbjct 255717 CCACCGCGCAGGCGAAGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 255658 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | || || || |||||||| ||||| ||||| ||| Sbjct 255657 AAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGG 255598 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || ||||| ||||| || || | ||| || || || Sbjct 255597 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTGTCGATCGTGTCGGAAGACTCGACC 255538 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472 ||||| ||||| ||||| || || || ||||||||||| || |||| Sbjct 255537 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 255492 >seq23 Length=1006473 Score = 113 bits (124), Expect = 1e-19 Identities = 141/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || ||||| | ||||| || || || | || || || |||||| Sbjct 106593 TCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 106534 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| || || || ||||| ||| ||||| || || ||||| || || || ||| Sbjct 106533 ATCAATCGTTGCTGG---TCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACG 106477 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| || || ||||| ||||||||||| || || ||||||||| Sbjct 106476 TTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTG 106417 Query 288460 ACGAATATCTGC 288471 ||||| || ||| Sbjct 106416 ACGAAGATTTGC 106405 >seq2 Length=936589 Score = 91.5 bits (100), Expect = 3e-13 Identities = 129/179 (72%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475 |||||| || | || |||||||| || || || || | |||||| | || | || Sbjct 330138 CCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACGAC 330079 Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGT-A 72534 || || || ||||| |||||||||||||| ||||||||||| | ||||| ||| | Sbjct 330078 CCCCTTCTACCCTCGCTCGCCTTACGGTGTTGCCAAGTTGTACGCCTTCTGGAT-TGTCA 330020 Query 72535 AAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAG 72593 | || ||||| |||||||| ||||||| | |||||| || ||||| |||||| Sbjct 330019 AGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 329961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654037256272