Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq10 140 8e-28
seq1 123 6e-23
seq23 113 1e-19
seq2 91.5 3e-13
>seq10
Length=1653987
Score = 140 bits (154), Expect = 8e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || || | | |||||||||| || || |||||||| || || ||
Sbjct 915061 TGACCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCC 915120
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
|| ||||| || || || || | || ||||| |||||||||| ||||| ||| |
Sbjct 915121 GCAAGCGTACGGCCATCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGA 915180
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| ||||| || ||||| || || || || ||||| || || | || |||||
Sbjct 915181 GGGATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGATTCG 915240
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||| ||||||| |||||||| || ||||||||
Sbjct 915241 ACCTCGAGCGTGATCGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290
Score = 129 bits (142), Expect = 1e-24
Identities = 169/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
||||| || ||||| | ||| || | |||| ||| || || ||||| || ||||||
Sbjct 1138142 TGTCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 1138201
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
||||| ||||| |||||||| | || || || |||||||| || || || || ||
Sbjct 1138202 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCG 1138258
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || || || || ||||| || || || || || || || || | || |||
Sbjct 1138259 GGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGAC 1138318
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct 1138319 TCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371
Score = 129 bits (142), Expect = 1e-24
Identities = 167/229 (73%), Gaps = 5/229 (2%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||| || || ||||| || |||||||||
Sbjct 1139285 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139344
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || |||||||| || || || || || |||
Sbjct 1139345 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1139401
Query 288367 --ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTA 288424
|| || || || ||||| || || || || || || || || | || ||| || |
Sbjct 1139402 GAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGA 1139461
Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||| ||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct 1139462 CTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||| || || ||||| || |||||||||
Sbjct 1138373 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138432
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || |||||||| || || || || || |||
Sbjct 1138433 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1138489
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || || || || || | || ||| ||
Sbjct 1138490 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1138549
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct 1138550 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||| || || ||||| || |||||||||
Sbjct 1138601 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138660
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || |||||||| || || || || || |||
Sbjct 1138661 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1138717
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || || || || || | || ||| ||
Sbjct 1138718 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1138777
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct 1138778 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||| || || ||||| || |||||||||
Sbjct 1138829 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138888
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || |||||||| || || || || || |||
Sbjct 1138889 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1138945
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || || || || || | || ||| ||
Sbjct 1138946 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139005
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct 1139006 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||| || || ||||| || |||||||||
Sbjct 1139057 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139116
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || |||||||| || || || || || |||
Sbjct 1139117 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1139173
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || || || || || | || ||| ||
Sbjct 1139174 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139233
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct 1139234 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||| || || ||||| || |||||||||
Sbjct 1139512 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139571
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || |||||||| || || || || || |||
Sbjct 1139572 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1139628
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || || || || || | || ||| ||
Sbjct 1139629 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139688
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct 1139689 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||| || || ||||| || |||||||||
Sbjct 1139740 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139799
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || |||||||| || || || || || |||
Sbjct 1139800 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1139856
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || || || || || | || ||| ||
Sbjct 1139857 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139916
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct 1139917 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || |||||||| | ||| || || ||||| || |||||||||
Sbjct 1139968 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1140027
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| |||||||| | || || || |||||||| || || || || || |||
Sbjct 1140028 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTG---GTCGGGG 1140084
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || || || || || | || ||| ||
Sbjct 1140085 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1140144
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct 1140145 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194
Score = 109 bits (120), Expect = 1e-18
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | | |||||||||| || || |||||||| || || || ||
Sbjct 915292 CCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCA 915351
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
||||| || || || || | ||||| || || ||||| ||||||||||| || |||
Sbjct 915352 AGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTG---GTCGGGG 915408
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || ||||| || || || || | || || ||
Sbjct 915409 GGAATACCCTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCG 915468
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| ||||| ||||| || || ||||||||||| || || |||||
Sbjct 915469 ACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518
>seq1
Length=554179
Score = 123 bits (136), Expect = 6e-23
Identities = 163/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | ||| || | |||| || || |||||||| || ||||||||
Sbjct 255717 CCACCGCGCAGGCGAAGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 255658
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || || || | || || || |||||||| ||||| ||||| |||
Sbjct 255657 AAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGG 255598
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || ||||| ||||| || || | ||| || || ||
Sbjct 255597 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTGTCGATCGTGTCGGAAGACTCGACC 255538
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCA 288472
||||| ||||| ||||| || || || ||||||||||| || ||||
Sbjct 255537 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCA 255492
>seq23
Length=1006473
Score = 113 bits (124), Expect = 1e-19
Identities = 141/192 (73%), Gaps = 6/192 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || || ||||| | ||||| || || || | || || || ||||||
Sbjct 106593 TCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 106534
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| || || || ||||| ||| ||||| || || ||||| || || || |||
Sbjct 106533 ATCAATCGTTGCTGG---TCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACG 106477
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| ||| || || ||||| ||||||||||| || || |||||||||
Sbjct 106476 TTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTG 106417
Query 288460 ACGAATATCTGC 288471
||||| || |||
Sbjct 106416 ACGAAGATTTGC 106405
>seq2
Length=936589
Score = 91.5 bits (100), Expect = 3e-13
Identities = 129/179 (72%), Gaps = 2/179 (1%)
Strand=Plus/Minus
Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475
|||||| || | || |||||||| || || || || | |||||| | || | ||
Sbjct 330138 CCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACGAC 330079
Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGT-A 72534
|| || || ||||| |||||||||||||| ||||||||||| | ||||| ||| |
Sbjct 330078 CCCCTTCTACCCTCGCTCGCCTTACGGTGTTGCCAAGTTGTACGCCTTCTGGAT-TGTCA 330020
Query 72535 AAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAG 72593
| || ||||| |||||||| ||||||| | |||||| || ||||| ||||||
Sbjct 330019 AGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 329961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654037256272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |