Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq10 125 8e-24 >seq10 Length=1653987 Score = 125 bits (138), Expect = 8e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || |||| | ||| | |||||| || | ||| |||||| || || ||||| || || Sbjct 1138145 CCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1138204 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || |||| || |||||||| || ||||| |||||||| |||||||||| || Sbjct 1138205 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138264 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCAC 42160 | || |||||||||| ||| | || | | | | | | || |||||| ||| || || Sbjct 1138265 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1138323 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||| || || ||||| || | ||||| || ||||||||||| Sbjct 1138324 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||| || | ||| | || ||||||||| || |||||||| || || || || | Sbjct 915304 CGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCA 915363 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||| || || || || ||||| ||||| ||||||| || | | ||||||| Sbjct 915364 TCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTG 915423 Query 42114 TCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| | || | ||||| | | | |||||| || || || |||| ||||| Sbjct 915424 TCC-TGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACCTCGAGGGTGAT 915482 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| |||||||| || ||||| |||||||||||||| Sbjct 915483 GGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 1138408 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1138467 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 |||||||| |||||||||| || | || |||||||||| ||| | || | | | | | Sbjct 1138468 GATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACAT 1138526 Query 42137 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || |||||| ||| || || || | ||| || || ||||| || | ||||| | Sbjct 1138527 TGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGA 1138586 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1138587 CGAAGATTTGCAT 1138599 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 1138636 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1138695 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 |||||||| |||||||||| || | || |||||||||| ||| | || | | | | | Sbjct 1138696 GATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACAT 1138754 Query 42137 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || |||||| ||| || || || | ||| || || ||||| || | ||||| | Sbjct 1138755 TGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGA 1138814 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1138815 CGAAGATTTGCAT 1138827 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 1138864 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1138923 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 |||||||| |||||||||| || | || |||||||||| ||| | || | | | | | Sbjct 1138924 GATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACAT 1138982 Query 42137 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || |||||| ||| || || || | ||| || || ||||| || | ||||| | Sbjct 1138983 TGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGA 1139042 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1139043 CGAAGATTTGCAT 1139055 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 1139092 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1139151 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 |||||||| |||||||||| || | || |||||||||| ||| | || | | | | | Sbjct 1139152 GATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACAT 1139210 Query 42137 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || |||||| ||| || || || | ||| || || ||||| || | ||||| | Sbjct 1139211 TGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGA 1139270 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1139271 CGAAGATTTGCAT 1139283 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 1139547 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1139606 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 |||||||| |||||||||| || | || |||||||||| ||| | || | | | | | Sbjct 1139607 GATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACAT 1139665 Query 42137 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || |||||| ||| || || || | ||| || || ||||| || | ||||| | Sbjct 1139666 TGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGA 1139725 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1139726 CGAAGATTTGCAT 1139738 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 1139775 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1139834 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 |||||||| |||||||||| || | || |||||||||| ||| | || | | | | | Sbjct 1139835 GATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACAT 1139893 Query 42137 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || |||||| ||| || || || | ||| || || ||||| || | ||||| | Sbjct 1139894 TGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGA 1139953 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1139954 CGAAGATTTGCAT 1139966 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 1140003 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1140062 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 |||||||| |||||||||| || | || |||||||||| ||| | || | | | | | Sbjct 1140063 GATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACAT 1140121 Query 42137 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || |||||| ||| || || || | ||| || || ||||| || | ||||| | Sbjct 1140122 TGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGA 1140181 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1140182 CGAAGATTTGCAT 1140194 Score = 113 bits (124), Expect = 5e-20 Identities = 143/193 (74%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 1139320 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1139379 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 |||||||| |||||||||| || | || |||||||||| ||| | || | | | | | Sbjct 1139380 GATGAGTCGTTGCTGGTCGGG-GGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTAACAT 1139437 Query 42137 CGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || |||||| ||| || || || | ||| || || ||||| || | ||||| | Sbjct 1139438 TGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGA 1139497 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 1139498 CGAAGATTTGCAT 1139510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212637036160