Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 251 7e-62 >seq2 Length=936589 Score = 251 bits (278), Expect = 7e-62 Identities = 732/1123 (65%), Gaps = 23/1123 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || || ||| || ||| | || || || |||| | Sbjct 3330 TACAACTACTTTGGCTTCAAGACGCTTGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 3389 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 ||| |||| || ||||| || |||| ||||| |||||| |||| || ||| | || ||| Sbjct 3390 GTTGCCGAACGCCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACAGTCATGAC 3449 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---ACCATGGCC 93894 || | || ||| | | | || |||| || | | || ||| ||| Sbjct 3450 ATCGAGCGCGTCCTGCAGTCGTACAACCTCATGTCCGA---GCGCTACTTCACCCACGCC 3506 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || ||||| ||| || | Sbjct 3507 TCGCCGACGCTCTTCAACGCCGGTACGCCCCACCCGCAGCTCTCGTCGTGCTTCTTGGTC 3566 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| |||||| ||| || || | ||| | |||||| || ||| |||| Sbjct 3567 ACGATGAAGGACGACTCGATCGAAGGCATCTACGATACGCTCAAGACGTGCGCGCTCATC 3626 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || || ||| Sbjct 3627 TCCAAGACCGCCGGTGGCATCGGCTTGAGCATCCACAACATCCGCGCGACCGGCTCGTAC 3686 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| || || ||| ||| |||||| ||||||| |||||||| |||| ||||||| Sbjct 3687 ATCGCCGGGACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGCGTCTACAACAAC 3746 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || |||||||| ||||| ||||| | | | || |||| || |||| ||| Sbjct 3747 ACCGCACGCTACGTCGACCAAGGTGGCAACAAGCGCCCCGGGGCTTTTGCCATCTACCTC 3806 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| ||||||| || |||||||||||||| || Sbjct 3807 GAGCCGTGGCACGCCGACGTCTTTGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAG 3866 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||||| ||| |||||| | || || || || ||| | || Sbjct 3867 GAAGTCCGCGCTCGCGATCTCTTCTTCGCGCTCTGGATCCCCGATCTCTTCATGGAGCGT 3926 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | | |||| || || || ||| || || || || ||| Sbjct 3927 GTCGAGGCCGCCGGTGACTGGCCCCTGTTCTGCCCCGCCGAGGCACCGGGTCTCCACGAG 3986 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 || | ||| | || | ||||| || ||||| | ||||| |||| | Sbjct 3987 GTCTATGGCGAGGAGTTCCGCGTCTTGTTTGAAAAGTACGAGAAGGAGGGCCGAGCCAAG 4046 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| || || ||||| ||| | |||| | || | ||||| ||||| ||| Sbjct 4047 AAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGT 4106 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 | |||| ||| | | ||||||| | | ||| ||||| |||||| || | ||||| Sbjct 4107 AACCCCTTCATGCTCTACAAGGACGCCGCGAACAAGAAGTCGAACCAGAAGAATCTCGGC 4166 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 |||||| || || ||||||||||||| ||||||| | | || |||||| Sbjct 4167 ACCATCAAGTCGTCCAACTTGTGCACCGAGATCATCGAGTACTCGGCCCCCGACGAGTGC 4226 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGTC 94673 || || || ||| ||| ||| ||| || | | ||| | | ||| || ||| Sbjct 4227 GCCGTTTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGTG 4280 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCT 94733 || |||| | ||| | ||| | | || ||| | | || ||| | Sbjct 4281 TATGACTTC-AAGAAGCTGCACGAGGTCGCCAAGGTCG---------TCGCGTTCAACTT 4330 Query 94734 GAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAA 94793 |||| | | |||||| |||| |||||||||| |||||| | ||||| ||| | Sbjct 4331 GAACCGCATCATCGACGTCAACTACTACCCCGTCATCGAGGCGCAAAACTCCAACTTCCG 4390 Query 94794 GCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || || || || |||||| Sbjct 4391 CCACCGTCCCATCGGCATCGGAGTGCAAGGGTTGGCCGACGCG 4433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723051583040