Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq2 251 7e-62
>seq2
Length=936589
Score = 251 bits (278), Expect = 7e-62
Identities = 732/1123 (65%), Gaps = 23/1123 (2%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | ||||||| |||||| || || ||| || ||| | || || || |||| |
Sbjct 3330 TACAACTACTTTGGCTTCAAGACGCTTGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 3389
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
||| |||| || ||||| || |||| ||||| |||||| |||| || ||| | || |||
Sbjct 3390 GTTGCCGAACGCCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACAGTCATGAC 3449
Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---ACCATGGCC 93894
|| | || ||| | | | || |||| || | | || ||| |||
Sbjct 3450 ATCGAGCGCGTCCTGCAGTCGTACAACCTCATGTCCGA---GCGCTACTTCACCCACGCC 3506
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| ||||| || |||||||| || || || || ||| | || ||||| ||| || |
Sbjct 3507 TCGCCGACGCTCTTCAACGCCGGTACGCCCCACCCGCAGCTCTCGTCGTGCTTCTTGGTC 3566
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
|||| |||| |||||| ||| || || | ||| | |||||| || ||| ||||
Sbjct 3567 ACGATGAAGGACGACTCGATCGAAGGCATCTACGATACGCTCAAGACGTGCGCGCTCATC 3626
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
|| || ||| || || ||||| | || ||||| || | || || | || || |||
Sbjct 3627 TCCAAGACCGCCGGTGGCATCGGCTTGAGCATCCACAACATCCGCGCGACCGGCTCGTAC 3686
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
||| ||| || || ||| ||| |||||| ||||||| |||||||| |||| |||||||
Sbjct 3687 ATCGCCGGGACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGCGTCTACAACAAC 3746
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || |||||||| ||||| ||||| | | | || |||| || |||| |||
Sbjct 3747 ACCGCACGCTACGTCGACCAAGGTGGCAACAAGCGCCCCGGGGCTTTTGCCATCTACCTC 3806
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||||| ||||| | ||| ||||||| || |||||||||||||| ||
Sbjct 3807 GAGCCGTGGCACGCCGACGTCTTTGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAG 3866
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
| | || | || ||||||| ||| |||||| | || || || || ||| | ||
Sbjct 3867 GAAGTCCGCGCTCGCGATCTCTTCTTCGCGCTCTGGATCCCCGATCTCTTCATGGAGCGT 3926
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|||||| | | |||| || || || ||| || || || || |||
Sbjct 3927 GTCGAGGCCGCCGGTGACTGGCCCCTGTTCTGCCCCGCCGAGGCACCGGGTCTCCACGAG 3986
Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434
|| | ||| | || | ||||| || ||||| | ||||| |||| |
Sbjct 3987 GTCTATGGCGAGGAGTTCCGCGTCTTGTTTGAAAAGTACGAGAAGGAGGGCCGAGCCAAG 4046
Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494
||| || || ||||| ||| | |||| | || | ||||| ||||| |||
Sbjct 4047 AAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGT 4106
Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554
| |||| ||| | | ||||||| | | ||| ||||| |||||| || | |||||
Sbjct 4107 AACCCCTTCATGCTCTACAAGGACGCCGCGAACAAGAAGTCGAACCAGAAGAATCTCGGC 4166
Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614
|||||| || || ||||||||||||| ||||||| | | || ||||||
Sbjct 4167 ACCATCAAGTCGTCCAACTTGTGCACCGAGATCATCGAGTACTCGGCCCCCGACGAGTGC 4226
Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGTC 94673
|| || || ||| ||| ||| ||| || | | ||| | | ||| || |||
Sbjct 4227 GCCGTTTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGTG 4280
Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAACCT 94733
|| |||| | ||| | ||| | | || ||| | | || ||| |
Sbjct 4281 TATGACTTC-AAGAAGCTGCACGAGGTCGCCAAGGTCG---------TCGCGTTCAACTT 4330
Query 94734 GAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAA 94793
|||| | | |||||| |||| |||||||||| |||||| | ||||| ||| |
Sbjct 4331 GAACCGCATCATCGACGTCAACTACTACCCCGTCATCGAGGCGCAAAACTCCAACTTCCG 4390
Query 94794 GCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836
|| || |||||||||||||| || || || || || ||||||
Sbjct 4391 CCACCGTCCCATCGGCATCGGAGTGCAAGGGTTGGCCGACGCG 4433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494723051583040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |