Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq10 147 2e-30 seq13 100 3e-16 seq2 89.7 5e-13 >seq10 Length=1653987 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| || | ||| | || ||||| ||||| || |||||||| | Sbjct 915064 CCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCA 915123 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| || ||||| ||||||||| ||||||||||||||||||| ||||| Sbjct 915124 AGCGTACGGCCATCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGGG 915183 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||||||| || || ||||| |||| |||| ||||||| ||||| Sbjct 915184 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTG-TCGATCGTGTCCGAGGATTCGAC 915242 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | ||| || ||||||| || || ||||| |||||||| Sbjct 915243 CTCGAGCGTGATCGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| || | ||| | || ||||| ||||| || |||||||| | Sbjct 915292 CCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCA 915351 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| || |||||||| || || |||| | ||||| || ||||| || Sbjct 915352 AGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGA 915411 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| | | || |||| | || | ||||||| |||||| Sbjct 915412 ATACCCTCCTTGTCC-TGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGAC 915470 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || ||||| || ||||| || ||||| || ||||| Sbjct 915471 CTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 Score = 107 bits (118), Expect = 2e-18 Identities = 165/234 (71%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939 ||||| ||| || || | || | |||||| || | || ||||| || || || ||||| Sbjct 1138139 TACTG-TCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTA 1138197 Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999 ||| | | |||||| || || ||||| || || ||| |||| | ||| ||||| || Sbjct 1138198 GTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 1138257 Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACT 127059 ||| || ||||||||||||||| || || ||| | | || | ||||||| Sbjct 1138258 GGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGA 1138317 Query 127060 CTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||||| | || | ||| |||||||||| || || || || || ||||| Sbjct 1138318 CTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||| ||||| || || || ||||| ||| | Sbjct 1138373 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138432 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | ||| ||||| ||||| || Sbjct 1138433 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138492 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | || | ||||||| ||||||| Sbjct 1138493 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1138552 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| |||||||||| || || || || || ||||| Sbjct 1138553 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||| ||||| || || || ||||| ||| | Sbjct 1138601 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138660 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | ||| ||||| ||||| || Sbjct 1138661 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138720 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | || | ||||||| ||||||| Sbjct 1138721 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1138780 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| |||||||||| || || || || || ||||| Sbjct 1138781 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||| ||||| || || || ||||| ||| | Sbjct 1138829 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1138888 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | ||| ||||| ||||| || Sbjct 1138889 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138948 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | || | ||||||| ||||||| Sbjct 1138949 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139008 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| |||||||||| || || || || || ||||| Sbjct 1139009 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||| ||||| || || || ||||| ||| | Sbjct 1139057 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139116 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | ||| ||||| ||||| || Sbjct 1139117 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1139176 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | || | ||||||| ||||||| Sbjct 1139177 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139236 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| |||||||||| || || || || || ||||| Sbjct 1139237 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||| ||||| || || || ||||| ||| | Sbjct 1139512 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139571 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | ||| ||||| ||||| || Sbjct 1139572 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1139631 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | || | ||||||| ||||||| Sbjct 1139632 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139691 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| |||||||||| || || || || || ||||| Sbjct 1139692 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||| ||||| || || || ||||| ||| | Sbjct 1139740 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139799 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | ||| ||||| ||||| || Sbjct 1139800 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1139859 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | || | ||||||| ||||||| Sbjct 1139860 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139919 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| |||||||||| || || || || || ||||| Sbjct 1139920 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||| ||||| || || || ||||| ||| | Sbjct 1139968 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1140027 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | ||| ||||| ||||| || Sbjct 1140028 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1140087 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | || | ||||||| ||||||| Sbjct 1140088 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1140147 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| |||||||||| || || || || || ||||| Sbjct 1140148 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194 Score = 104 bits (114), Expect = 2e-17 Identities = 160/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||| ||||| || || || ||||| ||| | Sbjct 1139285 CCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1139344 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | ||| ||||| ||||| || Sbjct 1139345 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGG-GGA 1139403 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | || | ||||||| ||||||| Sbjct 1139404 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACT 1139463 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| |||||||||| || || || || || ||||| Sbjct 1139464 TCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510 >seq13 Length=1203898 Score = 100 bits (110), Expect = 3e-16 Identities = 150/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939 ||||| ||| || || | || | |||||| || | || ||||| || || || ||||| Sbjct 755885 TACTG-TCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTA 755827 Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999 ||| | |||||| ||| || ||||| || || ||| |||| | ||| ||||| || Sbjct 755826 GTCGGCTCGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC 755767 Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACT 127059 || || ||||||||||||||| || || ||||| | || | ||||||| Sbjct 755766 TGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGA 755707 Query 127060 CTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091 ||||||||| | || | ||| |||||||||| Sbjct 755706 CTCGACTTCAAGCGTAATCGTCTTGCCGGTCA 755675 >seq2 Length=936589 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/175 (72%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 146635 GCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCG 146694 ||||| ||||||||||| || ||||| |||||| | | | |||| | |||||| Sbjct 4252 GCGATCGAGGCCAAGTTGCAAACGGCGCACTCGTCGGGGGCCGAGTACTCGATGATCTCG 4193 Query 146695 GCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTT--ACTAAACTTGTTGC 146752 | ||| | |||| |||||||| |||| | ||| || ||||| ||| |||||| Sbjct 4192 GTGCACAAGTTGGACGACTTGATGGTGCCGAGATTCTTCTGGTTCGACTT--CTTGTTCG 4135 Query 146753 AGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGAT 146807 || |||||||||||||||| | || ||||| ||||| | || ||||| ||| Sbjct 4134 CGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGGAT 4080 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCAC 47498 ||||||||||| |||||||| || ||| | || | | |||||| | | || Sbjct 55063 TACATCGAATTCGTCGCCGATCGACTGTTGGTCGCATTGGGCAACCCCAAGGTCTGGAAC 55004 Query 47499 ACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTC 47558 ||||||| || ||||| || ||||||| || ||||||||||||||||| || || ||| Sbjct 55003 GCCGAGAACCCCTTCGACTTCATGAACATGATCTCGCTCGAGGGCAAGACAAATTTCTTC 54944 Query 47559 GAGAAGCGCGT 47569 |||||||| || Sbjct 54943 GAGAAGCGAGT 54933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500657349760