Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq23 114 1e-20
seq10 102 7e-17
seq1 102 7e-17
seq13 84.2 2e-11
>seq23
Length=1006473
Score = 114 bits (126), Expect = 1e-20
Identities = 148/202 (73%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || |||||| | || ||| || | ||
Sbjct 106605 TGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCGAGCTGC 106546
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | ||||||||||||||||| ||||| |||||||| || ||||| || ||
Sbjct 106545 TTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTG 106486
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|||| || | || | |||||||| |||||||| ||||| || | ||| ||||| ||
Sbjct 106485 GCCTTGA-CGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 106427
Query 45317 TAGAGTTTTTACAAAAATTTGC 45338
||||| || || || ||||||
Sbjct 106426 AAGAGTCTTGACGAAGATTTGC 106405
>seq10
Length=1653987
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || ||||| ||||| || ||||| ||||| || || |||
Sbjct 1139965 ATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 1140024
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | || || | || || || ||| | || | |||||||||||| ||
Sbjct 1140025 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGG 1140084
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || ||||| || || | || | ||||| || ||||||
Sbjct 1140085 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1140144
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| || |||| ||| |||||||| | || || || || |||||||||
Sbjct 1140145 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATC 1140195
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || ||||| ||||| || ||||| ||||| || || |||
Sbjct 1138370 ATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 1138429
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | || || | || || || ||| | || | |||||||||||| ||
Sbjct 1138430 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGG 1138489
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || ||||| || || | || | ||||| || ||||||
Sbjct 1138490 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1138549
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| ||| |||||||| | || || || || ||||||||
Sbjct 1138550 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || ||||| ||||| || ||||| ||||| || || |||
Sbjct 1138598 ATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 1138657
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | || || | || || || ||| | || | |||||||||||| ||
Sbjct 1138658 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGG 1138717
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || ||||| || || | || | ||||| || ||||||
Sbjct 1138718 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1138777
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| ||| |||||||| | || || || || ||||||||
Sbjct 1138778 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || ||||| ||||| || ||||| ||||| || || |||
Sbjct 1138826 ATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 1138885
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | || || | || || || ||| | || | |||||||||||| ||
Sbjct 1138886 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGG 1138945
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || ||||| || || | || | ||||| || ||||||
Sbjct 1138946 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139005
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| ||| |||||||| | || || || || ||||||||
Sbjct 1139006 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || ||||| ||||| || ||||| ||||| || || |||
Sbjct 1139054 ATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 1139113
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | || || | || || || ||| | || | |||||||||||| ||
Sbjct 1139114 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGG 1139173
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || ||||| || || | || | ||||| || ||||||
Sbjct 1139174 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139233
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| ||| |||||||| | || || || || ||||||||
Sbjct 1139234 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || ||||| ||||| || ||||| ||||| || || |||
Sbjct 1139509 ATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 1139568
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | || || | || || || ||| | || | |||||||||||| ||
Sbjct 1139569 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGG 1139628
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || ||||| || || | || | ||||| || ||||||
Sbjct 1139629 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139688
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| ||| |||||||| | || || || || ||||||||
Sbjct 1139689 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || ||||| ||||| || ||||| ||||| || || |||
Sbjct 1139737 ATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 1139796
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | || || | || || || ||| | || | |||||||||||| ||
Sbjct 1139797 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGG 1139856
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || ||||| || || | || | ||||| || ||||||
Sbjct 1139857 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139916
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| ||| |||||||| | || || || || ||||||||
Sbjct 1139917 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || || | ||| || ||||| || || || ||||||||||| || |||||
Sbjct 915064 CCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCA 915123
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| || ||| || | || ||||| ||| | |||||||| ||||| || || ||
Sbjct 915124 AGCGTACGGCCATCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGGG 915183
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
|||||||| || || ||||| || |||| || | || | ||||| || || |||||
Sbjct 915184 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGATTCGAC 915242
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || | ||| || ||||| | || || ||||| || |||||
Sbjct 915243 CTCGAGCGTGATCGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/230 (70%), Gaps = 1/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || ||||| ||||| || ||||| ||||| || || |||
Sbjct 1139282 ATACCACCACGCAGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 1139341
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | || || | || || || ||| | || | |||||||||||| ||
Sbjct 1139342 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGG- 1139400
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||| || || || ||||| || || | || | ||||| || ||||||
Sbjct 1139401 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1139460
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| ||| |||||||| | || || || || ||||||||
Sbjct 1139461 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | ||| || ||||| || || || ||||||||||| || |||||
Sbjct 915289 ATACCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCC 915348
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || ||| || | ||||| || || | || | || || ||||| ||
Sbjct 915349 GCAAGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGG 915408
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || || || || ||||| || ||||| || | ||||| || ||||||
Sbjct 915409 GGAATACCCTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCG 915468
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || | || ||||| || ||||| || ||||| |||||||||
Sbjct 915469 ACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCATC 915519
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172
||| || ||||| | | ||| | || || || || ||||| ||||| || || |||
Sbjct 1138144 TCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1138203
Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232
|| || | || || | || || || ||| | || | |||||||||||| || ||
Sbjct 1138204 GAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGG 1138263
Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292
|||||| || || || ||||| || || | || | ||||| || ||||||||
Sbjct 1138264 AATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1138323
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || |||| ||| |||||||| | || || || || ||||||||
Sbjct 1138324 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371
>seq1
Length=554179
Score = 102 bits (112), Expect = 7e-17
Identities = 146/203 (72%), Gaps = 2/203 (1%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || || ||| | ||| | ||| || | ||
Sbjct 255693 TGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGACCATCCTCGAGCTGC 255634
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || | ||||| ||||| ||||| |||||||| || ||||| || ||
Sbjct 255633 TTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTG 255574
Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
||||| || | || | ||||||||||||||||| ||||| || | || ||||| ||
Sbjct 255573 GCTTTGA-CGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 255515
Query 45317 TAGAGTTTTTACAAAAATTTGCA 45339
|| || || || || |||||||
Sbjct 255514 GAGGGTCTTGACGAAGATTTGCA 255492
>seq13
Length=1203898
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172
||| || ||||| | | ||| | || || || || ||||| ||||| || || |||
Sbjct 755880 TCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 755821
Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232
||| | ||| || | || || || ||| | || | |||||||||||| || ||
Sbjct 755820 TCGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGG 755761
Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292
|||||| || || || ||||| || |||| || | ||||| || ||||||||
Sbjct 755760 AATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 755701
Query 45293 TTCGAGAGTAACCGTTTTGCCGGT 45316
||| || |||| ||| ||||||||
Sbjct 755700 TTCAAGCGTAATCGTCTTGCCGGT 755677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003064399040
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