Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 197 2e-45
seq6 140 4e-28
seq8 111 2e-19
>seq2
Length=936589
Score = 197 bits (218), Expect = 2e-45
Identities = 540/816 (66%), Gaps = 12/816 (1%)
Strand=Plus/Minus
Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534
|||||| || || || || ||||| || || ||| |||||||| | ||||| || ||
Sbjct 4208 GTACTCGATGATCTCGGTGCACAAGTTGGACGACTTGATGGTGCCGAGATTCTTCTGGTT 4149
Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594
||||| |||| || |||||||||||||| | || | || ||||| ||||
Sbjct 4148 CGACTTCTTGTTCGCGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGGGC 4089
Query 116595 CTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCT 116653
|| ||| || || | ||| | | | ||| | || | || |||||||| |||||||
Sbjct 4088 CTCGAGGATCGCGTACCAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCTCGGCCCTCCT 4030
Query 116654 CCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGT 116712
|||||||||| | | | | ||||| || || | || |||| ||| || |||
Sbjct 4029 TCTCGTACTTTTCAAACAAGACGCGGAACTCCTCGCC-ATAGACCTCGTGGAGACCCGGT 3971
Query 116713 GCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 116772
|||| | || ||||| || | ||| | ||| | |||| || |||| |||||||||
Sbjct 3970 GCCTCGGCGGGGCAGAACAGGGGCCAGTCACCGGCGGCCTCGACACGCTCCATGAAGAGA 3911
Query 116773 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 116832
|| |||||||||||||| |||||||||| ||| ||| |||| || | || || ||
Sbjct 3910 TCGGGGATCCAGAGCGCGAAGAAGAGATCGCGAGCGCGGACTTCCTCCTTGCCGTGGTTC 3851
Query 116833 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 116892
|| | || | || || | || || ||||||||||| || ||||| | || |
Sbjct 3850 TTGCGAAGGTCGAGGAACTCAAAGACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAA 3791
Query 116893 GACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGA 116949
| ||| ||| ||| | |||| || || | || || ||| | |||||
Sbjct 3790 GCCCCGGGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCGGTGTTGTTGTAGACGCGG 3731
Query 116950 AGCATTGGAATGATACCATCAGATTGGCCATTTGTCCC-CCGA-ATACGAGACTTGTTGG 117007
||||| || | ||| || | || | ||| || ||||| ||| |||||| | | | |
Sbjct 3730 AGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTCCCGGCGATGTACGAGCC--GGTCG 3673
Query 117008 CTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACT 117067
| | || | ||||||| || || || || || || ||| ||||| | ||||||
Sbjct 3672 CGCGGATGTTGTGGATGCTCAAGCCGATGCCACCGGCGGTCTTGGAGATGAGCGCGCACG 3613
Query 117068 CCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGC 117127
| |||| | ||||||| || ||||||||||| |||| | | || | ||||||
Sbjct 3612 TCTTGAGCGTATCGTAGATGCCTTCGATCGAGTCGTCCTTCATCGTGACCAAGAAGCACG 3553
Query 117128 TCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACA 117187
||| | || || || ||||| ||||||||||| || || | |||||| ||||
Sbjct 3552 ACGAGAGCTGCGGGTGGGGCGTACCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGT 3493
Query 117188 TACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATAC 117247
| | |||||| | ||| | || || ||| ||||| | | ||| || |
Sbjct 3492 AGCGCTCGGACATGAGGTTGTACGACTGCAGGACGCGCTCGATGTCATGACTGTGGATGC 3433
Query 117248 CGATTGAGACCCGCATAAACATGTATTG-GGGTGTT 117282
||| | ||| ||||| | ||||| ||| ||| |||
Sbjct 3432 CGACGGCGACACGCATGAGCATGTGTTGCGGGCGTT 3397
>seq6
Length=2534666
Score = 140 bits (154), Expect = 4e-28
Identities = 285/417 (68%), Gaps = 16/417 (4%)
Strand=Plus/Minus
Query 176630 TTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATGAGC 176689
|||| ||| |||||||| ||||| || ||||||| |||| ||| | ||| |||||||||
Sbjct 1950989 TTGATGATTAGACCCTTGATGTGAGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 1950930
Query 176690 CGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAAGACCCAAAATC 176749
||||| || ||| | || || || |||| || || || |||||||||||
Sbjct 1950929 TTGCCATAACGGAGCGAGTCGACGTCGGTGTACACCTTGCCCTGCTGCAGACCCAAAATT 1950870
Query 176750 TTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCA---CTGAAGCGTCGCGG 176806
| ||||| | | || ||| | ||| | || |||| | | || |||||
Sbjct 1950869 TGCTTGATCGCTTGGATCTCA-GCATTGTCG--AGCAACGCCTTGCCCGCGGCTTCGCGC 1950813
Query 176807 ACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAG 176866
|| || ||||||| || |||||||| ||||| |||| || ||||| || || ||
Sbjct 1950812 ACGTTGAGCAACTTCCCTCGCAGAGGGAAAACACCATAGTTGTCTCGACCGACGACGGAC 1950753
Query 176867 AGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTT 176926
||||| | || ||||| | ||| |||||||| || || |||| ||||||||| || ||
Sbjct 1950752 AGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCAGTCAAGATGAGCGTGCAATTC 1950693
Query 176927 --CCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTT 176984
|| | | | ||| || || ||||||||||| |||| |||| | ||| || ||
Sbjct 1950692 GACCCGTTCCT--CGTTCCAGCGTTGTTCGCATCTTCCAGCTTGACCAAACCCGTGATAC 1950635
Query 176985 TGGA---CTTACGAGCACCATCTGTCTTCTTGAGTTCCTTCATCTCCTTGAACTTGG 177038
|| ||| | ||||| ||||||||||| || || |||||||||||
Sbjct 1950634 GCGATCGCTTGTG---TCCATCGGTCTTCTTGAGCATCTGGTCCTGCTTGAACTTGG 1950581
>seq8
Length=1461820
Score = 111 bits (122), Expect = 2e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 10441 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 10500
|||||||| || |||| ||| ||||||| || || || | || ||| |||||||
Sbjct 1423759 TATCAAGCCTCGACCTCCGAGTTGTTTGGCAAGGTCTTCGAGACTCCTCAATCTGAGGAG 1423700
Query 10501 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 10560
||||||||| | || || || || || ||| | ||| | || ||| ||||
Sbjct 1423699 ACGCCCTTCCACCCTCGTTCGCCTTACGGTGTCGCCAAGTTGTACGCGTTCTGGATCGTC 1423640
Query 10561 AAGAATTATCGCGAATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACGAG 10620
||||| || ||||| || || | | | | |||| |||||| |||||||||||||||
Sbjct 1423639 AAGAACTACCGCGAGTCTTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 1423580
Query 10621 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 10659
|| ||||||||||||| |||||| || | |||||||
Sbjct 1423579 TCCCCCCGTCGTGGCCGCACTTTCGTCACGAGGAAGATC 1423541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507015947840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |