Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 104 4e-17 >seq2 Length=936589 Score = 104 bits (114), Expect = 4e-17 Identities = 283/431 (66%), Gaps = 2/431 (0%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 |||||| || || ||| |||||| || || | || ||||| || || | | | | || Sbjct 3923 CTCCATGAAGAGATCGGGGATCCAGAGCGCGAAGAAGAGATCGCGAGCGCGGACTTCCTC 3864 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAA 205284 | || ||||||| | ||| || | | | |||||||||||||||||| | Sbjct 3863 CTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTCAAAGACGTCGGCGTGCCACGGCTCGAG 3804 Query 205285 CCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGC 205344 | | ||| | || || || | |||||| ||||| ||||| || ||| | | Sbjct 3803 GTAGATGGCAAAAGCCCCGGGGCGCTTGTTGCCACCTTGGTCGACGTAGCGTGCGGTGTT 3744 Query 205345 GTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGC 205404 |||| | || || ||||| || || | ||||| | | |||||||| | | |||| Sbjct 3743 GTTGTAGACGCGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTCCCGGCGATGTA 3684 Query 205405 CGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGAT 205464 |||||| || | | |||| |||| | ||| || || || | ||||| ||| Sbjct 3683 CGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAGCCGATGCCACCGGCGGTCTTGGAGAT 3624 Query 205465 CTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCA 205523 | |||||| ||||| || || |||||||||| |||| || |||||| || || | Sbjct 3623 GAGCGCGCACGTCTTG-AGCGTATCGTAGATGCCTTCGATCGAGTCGTCCTTCATCGTGA 3565 Query 205524 CCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGG 205583 ||| ||||||| | |||| | | || || |||| ||||||||| || || Sbjct 3564 CCAAGAAGCACGACGAGAGCTGCGGGTGGGGCGTACCGGCGTTGAAGAGCGTCGGCGAGG 3505 Query 205584 CGTGGCTGAAG 205594 ||||| ||||| Sbjct 3504 CGTGGGTGAAG 3494 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 ||||||||||| ||||||||| ||| || |||||||| || ||||||| ||||||||| Sbjct 55282 AACAGGAGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAG 55341 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGG 160019 | | | | || ||||| | || ||| |||||||| || |||| Sbjct 55342 AAGGTCAATCCGGGCATCAAGCCTCGCTTCTTGAGCCAGAAGATGG 55387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154961453440