Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq23 140 4e-28 seq10 131 2e-25 seq1 127 2e-24 seq13 104 3e-17 >seq23 Length=1006473 Score = 140 bits (154), Expect = 4e-28 Identities = 147/191 (77%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| |||| | |||||| | || |||||||||||||||||||| Sbjct 106594 CTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 106535 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || |||||||| | ||| | || |||||||| |||||| ||||| ||| Sbjct 106534 GATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 106476 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| ||| || || || | ||||| || |||||||| || || || | Sbjct 106475 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 106416 Query 46581 CAAAGATTTGC 46591 | ||||||||| Sbjct 106415 CGAAGATTTGC 106405 >seq10 Length=1653987 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| |||||||| |||| |||||||||||||||||||| Sbjct 1138180 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1138239 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||||| || | || |||||||||| ||||| ||| | | Sbjct 1138240 GATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATT 1138299 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || || | ||| || || ||||| |||| || || || Sbjct 1138300 GTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGAC 1138359 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 1138360 GAAGATTTGCAT 1138371 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||| ||||| |||||||||| |||||||| || Sbjct 1138385 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1138444 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | || |||||||||| || | || ||||||| Sbjct 1138445 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1138504 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||| | | | | |||||| ||| || || || | ||| || Sbjct 1138505 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1138564 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || || || ||||||||||| Sbjct 1138565 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||| ||||| |||||||||| |||||||| || Sbjct 1138613 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1138672 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | || |||||||||| || | || ||||||| Sbjct 1138673 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1138732 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||| | | | | |||||| ||| || || || | ||| || Sbjct 1138733 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1138792 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || || || ||||||||||| Sbjct 1138793 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||| ||||| |||||||||| |||||||| || Sbjct 1138841 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1138900 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | || |||||||||| || | || ||||||| Sbjct 1138901 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1138960 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||| | | | | |||||| ||| || || || | ||| || Sbjct 1138961 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139020 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || || || ||||||||||| Sbjct 1139021 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||| ||||| |||||||||| |||||||| || Sbjct 1139069 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139128 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | || |||||||||| || | || ||||||| Sbjct 1139129 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1139188 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||| | | | | |||||| ||| || || || | ||| || Sbjct 1139189 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139248 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || || || ||||||||||| Sbjct 1139249 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||| ||||| |||||||||| |||||||| || Sbjct 1139524 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139583 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | || |||||||||| || | || ||||||| Sbjct 1139584 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1139643 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||| | | | | |||||| ||| || || || | ||| || Sbjct 1139644 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139703 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || || || ||||||||||| Sbjct 1139704 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||| ||||| |||||||||| |||||||| || Sbjct 1139752 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139811 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | || |||||||||| || | || ||||||| Sbjct 1139812 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1139871 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||| | | | | |||||| ||| || || || | ||| || Sbjct 1139872 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139931 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || || || ||||||||||| Sbjct 1139932 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||| ||||| |||||||||| |||||||| || Sbjct 1139980 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1140039 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | || |||||||||| || | || ||||||| Sbjct 1140040 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1140099 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||| | | | | |||||| ||| || || || | ||| || Sbjct 1140100 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1140159 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || || || ||||||||||| Sbjct 1140160 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194 Score = 127 bits (140), Expect = 2e-24 Identities = 158/215 (73%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||| ||||| |||||||||| |||||||| || Sbjct 1139297 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139356 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | || |||||||||| || | || ||||||| Sbjct 1139357 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGG-GGGAATGCCCTCCTTG 1139415 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||| | | | | |||||| ||| || || || | ||| || Sbjct 1139416 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139475 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| || || || ||||||||||| Sbjct 1139476 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| || ||||| | || |||||||||||| ||||| || | || || || | Sbjct 915076 CGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCA 915135 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||||||||| || ||||| ||||| |||||||| || | || | || |||||| Sbjct 915136 TCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATGCCTTCCTTG 915195 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||| ||||| ||| | | | |||||| ||||| || || | |||||| Sbjct 915196 TCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGATTCGACCTCGAGCGTGAT 915254 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || |||| || || |||||||| ||||| Sbjct 915255 CGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| || ||||| | || |||||||||||| ||||| || | || || || | Sbjct 915304 CGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCA 915363 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||| ||||| || || || | ||||| ||||||| || | | ||||||| Sbjct 915364 TCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTG 915423 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| |||| | | | |||||| || || || || | |||||| Sbjct 915424 TCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACCTCGAGGGTGATG 915483 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| || || || |||||||||||||| Sbjct 915484 GTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 >seq1 Length=554179 Score = 127 bits (140), Expect = 2e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| | ||||| | || |||||||||||||||||||| Sbjct 255682 CTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAA 255623 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || || ||||||| ||| | || |||||||| |||||| |||| ||| Sbjct 255622 GATGAGACGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTGA-CGT 255564 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| || || || || | |||||||| |||||||| || || || | Sbjct 255563 TGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 255504 Query 46581 CAAAGATTTGCA 46592 | |||||||||| Sbjct 255503 CGAAGATTTGCA 255492 >seq13 Length=1203898 Score = 104 bits (114), Expect = 3e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| | | ||||| | || |||||||||||||||||||| Sbjct 755844 CTCCTTCTGGATGTTGTAGTCGGCTCGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAA 755785 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | || | || |||||||||| ||||| ||||| | Sbjct 755784 GATGAGTCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 755725 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | |||||| ||| || || || | ||| || || ||||| |||| Sbjct 755724 GTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCA 755675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238230428480