Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq23 140 4e-28
seq10 131 2e-25
seq1 127 2e-24
seq13 104 3e-17
>seq23
Length=1006473
Score = 140 bits (154), Expect = 4e-28
Identities = 147/191 (77%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| ||||| |||| | |||||| | || ||||||||||||||||||||
Sbjct 106594 CTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 106535
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| || |||||||| | ||| | || |||||||| |||||| ||||| |||
Sbjct 106534 GATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 106476
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||| ||| || || || | ||||| || |||||||| || || || |
Sbjct 106475 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 106416
Query 46581 CAAAGATTTGC 46591
| |||||||||
Sbjct 106415 CGAAGATTTGC 106405
>seq10
Length=1653987
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||||| |||||||| |||| ||||||||||||||||||||
Sbjct 1138180 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAA 1138239
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || |||||||||| || | || |||||||||| ||||| ||| | |
Sbjct 1138240 GATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATT 1138299
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| ||| || || || | ||| || || ||||| |||| || || ||
Sbjct 1138300 GTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGAC 1138359
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 1138360 GAAGATTTGCAT 1138371
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||||| |||||||| ||
Sbjct 1138385 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1138444
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | || |||||||||| || | || |||||||
Sbjct 1138445 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1138504
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| ||| | | | | |||||| ||| || || || | ||| ||
Sbjct 1138505 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1138564
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| || || || |||||||||||
Sbjct 1138565 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||||| |||||||| ||
Sbjct 1138613 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1138672
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | || |||||||||| || | || |||||||
Sbjct 1138673 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1138732
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| ||| | | | | |||||| ||| || || || | ||| ||
Sbjct 1138733 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1138792
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| || || || |||||||||||
Sbjct 1138793 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||||| |||||||| ||
Sbjct 1138841 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1138900
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | || |||||||||| || | || |||||||
Sbjct 1138901 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1138960
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| ||| | | | | |||||| ||| || || || | ||| ||
Sbjct 1138961 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139020
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| || || || |||||||||||
Sbjct 1139021 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||||| |||||||| ||
Sbjct 1139069 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139128
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | || |||||||||| || | || |||||||
Sbjct 1139129 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1139188
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| ||| | | | | |||||| ||| || || || | ||| ||
Sbjct 1139189 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139248
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| || || || |||||||||||
Sbjct 1139249 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||||| |||||||| ||
Sbjct 1139524 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139583
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | || |||||||||| || | || |||||||
Sbjct 1139584 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1139643
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| ||| | | | | |||||| ||| || || || | ||| ||
Sbjct 1139644 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139703
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| || || || |||||||||||
Sbjct 1139704 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||||| |||||||| ||
Sbjct 1139752 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139811
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | || |||||||||| || | || |||||||
Sbjct 1139812 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1139871
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| ||| | | | | |||||| ||| || || || | ||| ||
Sbjct 1139872 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139931
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| || || || |||||||||||
Sbjct 1139932 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||||| |||||||| ||
Sbjct 1139980 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1140039
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | || |||||||||| || | || |||||||
Sbjct 1140040 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1140099
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| ||| | | | | |||||| ||| || || || | ||| ||
Sbjct 1140100 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1140159
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| || || || |||||||||||
Sbjct 1140160 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194
Score = 127 bits (140), Expect = 2e-24
Identities = 158/215 (73%), Gaps = 1/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||||| |||||||| ||
Sbjct 1139297 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139356
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | || |||||||||| || | || |||||||
Sbjct 1139357 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGG-GGGAATGCCCTCCTTG 1139415
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| ||| | | | | |||||| ||| || || || | ||| ||
Sbjct 1139416 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139475
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| || || || |||||||||||
Sbjct 1139476 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510
Score = 116 bits (128), Expect = 4e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
||||| || ||||| | || |||||||||||| ||||| || | || || || |
Sbjct 915076 CGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCA 915135
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| ||||||||||| || ||||| ||||| |||||||| || | || | || ||||||
Sbjct 915136 TCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATGCCTTCCTTG 915195
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| ||||| ||||| ||| | | | |||||| ||||| || || | ||||||
Sbjct 915196 TCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGATTCGACCTCGAGCGTGAT 915254
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || |||| || || |||||||| |||||
Sbjct 915255 CGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290
Score = 109 bits (120), Expect = 6e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
||||| || ||||| | || |||||||||||| ||||| || | || || || |
Sbjct 915304 CGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCA 915363
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||| ||||| || || || | ||||| ||||||| || | | |||||||
Sbjct 915364 TCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTG 915423
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| ||||| |||| | | | |||||| || || || || | ||||||
Sbjct 915424 TCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACCTCGAGGGTGATG 915483
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||||||| || || || ||||||||||||||
Sbjct 915484 GTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518
>seq1
Length=554179
Score = 127 bits (140), Expect = 2e-24
Identities = 145/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| |||||||||| | ||||| | || ||||||||||||||||||||
Sbjct 255682 CTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAA 255623
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || || ||||||| ||| | || |||||||| |||||| |||| |||
Sbjct 255622 GATGAGACGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTGA-CGT 255564
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||| || || || || | |||||||| |||||||| || || || |
Sbjct 255563 TGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 255504
Query 46581 CAAAGATTTGCA 46592
| ||||||||||
Sbjct 255503 CGAAGATTTGCA 255492
>seq13
Length=1203898
Score = 104 bits (114), Expect = 3e-17
Identities = 125/170 (74%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||||| | | ||||| | || ||||||||||||||||||||
Sbjct 755844 CTCCTTCTGGATGTTGTAGTCGGCTCGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAA 755785
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || |||||||| | || | || |||||||||| ||||| ||||| |
Sbjct 755784 GATGAGTCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 755725
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | |||||| ||| || || || | ||| || || ||||| ||||
Sbjct 755724 GTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTCTTGCCGGTCA 755675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238230428480
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