Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq12 374 1e-98
seq20 132 6e-26
seq7 107 2e-18
seq17 102 1e-16
>seq12
Length=1963039
Score = 374 bits (414), Expect = 1e-98
Identities = 661/960 (69%), Gaps = 5/960 (1%)
Strand=Plus/Plus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
|| || || | ||| ||||| ||||| | || ||||||||||| ||||||||||||||
Sbjct 410690 TCGCCGGTGAGGATCGCGGCCTGGACGGCGGCGCCGTATGCGACGGCCTCATCGGGGTTG 410749
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|||| || || | || || ||||| || || ||||| | | | || | || |||
Sbjct 410750 ATCGACTTGTTGGGCTCCTTGCCGTTGAAGTAGTCCGAGACAAGCTTCTGCACCTTGGGG 410809
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || |||||||| | |||||| || | || | || |||||||| |||
Sbjct 410810 ATACGGGTTGAGCCACCGACAAGAACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAG 410869
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| || || ||| || || || ||||| |||||||||||| |||| ||
Sbjct 410870 TCGCGGAGGACTTTCTCCACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCT 410929
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| || || ||||| || ||||| || ||||| || | ||| ||| | | ||| || ||
Sbjct 410930 TCGAAGCGAGCACGCGTGATGGAGGTGTAGAAGTCGATGCCCTCGAAGAGCGAGTCGATC 410989
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
|| ||||| || || || | |||||| | |||||||| || |||||||| || || ||
Sbjct 410990 TCGATGGTGGTCTGAGCGGCCGAAGAAAGGGTTCGCTTGGCACGCTCACATGCGGTGCGA 411049
Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429
| |||||| || || || | ||| ||| | ||| ||||| | || || || |||||
Sbjct 411050 AGACGACGGAGAGCTCGGGCGTTCGAGGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 411109
Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489
| |||||| | ||||| ||||| || ||||| |||||||| || || ||
Sbjct 411110 GCGACGAAGTGGGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 411169
Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549
||||| || |||||||| |||||||| | || ||| | || | ||| || || |||||
Sbjct 411170 GCGGTGGCCTTGACTTCGAAGATACCCTCCTCGATGGTCAAGAGCGAGACGTCGAACGTT 411229
Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609
|| || || || || || ||||| |||||| | || | | | ||||| ||||| ||
Sbjct 411230 CCTCCTCCAAGATCGAAGATGAGAACGTTCTTCTCACCAACGGTCTTCTTGTCGAGGCCA 411289
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669
|| ||||| || || || || || || ||||| ||||| || ||| ||||| | ||
Sbjct 411290 TAAGCGATTGCGGCGGCGGTGGGCTCGTTAATGATACGGAGGACGTTGAGGCCCGAGATG 411349
Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729
| ||||| || || |||||||| ||||| ||||| |||||||| ||||| || |||
Sbjct 411350 ACACCAGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGACG 411409
Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTG-GTAAG 7788
|| |||| | || || | ||||| || | || ||| | || ||||| ||| | |||
Sbjct 411410 ACGGCGTTGGCAACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAAG 411469
Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848
| ||| || ||||| || |||| | ||||| || || || || | || || ||
Sbjct 411470 -ATCATGGACGAAATTTCCTCAGGGGTGAACTGCTTGGTCTCGCCTCGGTACTCGACCTC 411528
Query 7849 AATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908
|| | ||| || | || | || ||||| | | ||| | ||||| |||
Sbjct 411529 GATGACGGGCTT---GGTTGCCTTGTCGACGACCTTGAAGGGCCAGTGCTTCATGTCGGA 411585
Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968
|| |||| || |||||| |||||||| ||||| ||||| ||||| |||||
Sbjct 411586 CTGAACCTCGGCATCGCCCCACTTTCGGCCGATAAGTCGCTTGGCATCGAAAACGGTGTT 411645
>seq20
Length=1861728
Score = 132 bits (146), Expect = 6e-26
Identities = 226/327 (69%), Gaps = 3/327 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||| ||| || || || |||||||| ||||||||||| |||
Sbjct 546816 TCGAAGTCCTCACCACCCAGGTGGGTGTCACCGGCGGTCGCCAAGACTTCAAAGACACCG 546875
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || || | | ||| ||||| || || || || || || || ||| || | |
Sbjct 546876 TCCTCGATCGAAAGGAGCGAGACATCGAAAGTTCCTCCTCCGAGATCGTAAACGATGATG 546935
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | | | |||| || |||||||| ||||| || || || || || ||
Sbjct 546936 TTGCGCTCGCCCCC---GGTCTTGTCAAGACCGTAAGCGATCGCGGCGGCGGTGGGCTCG 546992
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | | ||| || ||| || || || || || | || || || || ||||||||
Sbjct 546993 TTGACGACACGGAGGACGTTAAGACCGGCGATCGTGCCGGCGTCCTTGGTGGCTTGTCGC 547052
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| |||||||| ||||| || ||||| |||| ||||| ||||| || |
Sbjct 547053 TGAGCGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 547112
Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783
|| | || ||| | || ||||| |||
Sbjct 547113 TAGGCCTCGGCGGTCTCCTTCATCTTG 547139
>seq7
Length=2982376
Score = 107 bits (118), Expect = 2e-18
Identities = 116/153 (76%), Gaps = 3/153 (2%)
Strand=Plus/Minus
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052
||| |||| ||| || || ||||| || | | | || || |||||||| || |||||
Sbjct 1363914 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACGTAAGAGGGGGT 1363858
Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112
|| || || || |||||||| || || || || || ||||||||||||||||| |||||
Sbjct 1363857 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1363798
Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145
||| || || || ||||| | ||| ||||| ||
Sbjct 1363797 GCAAGAGTAGGTGGTTCCGAGATCGATACCTAT 1363765
>seq17
Length=1177576
Score = 102 bits (112), Expect = 1e-16
Identities = 133/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659
||| |||||||| |||| || || || || || || || || | ||| || || ||
Sbjct 882371 ATCAAGACCGTAGGCGAGCGCGGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCGAG 882312
Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719
||||| || || | ||||| || ||||||||||| ||||| ||||| |||||||| ||
Sbjct 882311 ACCAGCGATCGTACCAGCATCCTTGGTCGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGG 882252
Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779
||| || ||||| || | | |||| ||| ||||| || ||| || | || |||||
Sbjct 882251 GACGGTGACGACGGCTTGCTTGACCGACTTTCCGAGGTATCCTTCTGCAGTCTCCTTCAT 882192
Query 7780 TTTG 7783
|||
Sbjct 882191 CTTG 882188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132609460160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |