Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq12 374 1e-98 seq20 132 6e-26 seq7 107 2e-18 seq17 102 1e-16 >seq12 Length=1963039 Score = 374 bits (414), Expect = 1e-98 Identities = 661/960 (69%), Gaps = 5/960 (1%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 || || || | ||| ||||| ||||| | || ||||||||||| |||||||||||||| Sbjct 410690 TCGCCGGTGAGGATCGCGGCCTGGACGGCGGCGCCGTATGCGACGGCCTCATCGGGGTTG 410749 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 |||| || || | || || ||||| || || ||||| | | | || | || ||| Sbjct 410750 ATCGACTTGTTGGGCTCCTTGCCGTTGAAGTAGTCCGAGACAAGCTTCTGCACCTTGGGG 410809 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | |||||| || | || | || |||||||| ||| Sbjct 410810 ATACGGGTTGAGCCACCGACAAGAACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAG 410869 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||| || || || ||||| |||||||||||| |||| || Sbjct 410870 TCGCGGAGGACTTTCTCCACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCT 410929 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || ||||| || ||||| || | ||| ||| | | ||| || || Sbjct 410930 TCGAAGCGAGCACGCGTGATGGAGGTGTAGAAGTCGATGCCCTCGAAGAGCGAGTCGATC 410989 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | |||||||| || |||||||| || || || Sbjct 410990 TCGATGGTGGTCTGAGCGGCCGAAGAAAGGGTTCGCTTGGCACGCTCACATGCGGTGCGA 411049 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || || || | ||| ||| | ||| ||||| | || || || ||||| Sbjct 411050 AGACGACGGAGAGCTCGGGCGTTCGAGGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 411109 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 411110 GCGACGAAGTGGGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 411169 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || |||||||| |||||||| | || ||| | || | ||| || || ||||| Sbjct 411170 GCGGTGGCCTTGACTTCGAAGATACCCTCCTCGATGGTCAAGAGCGAGACGTCGAACGTT 411229 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | || | | | ||||| ||||| || Sbjct 411230 CCTCCTCCAAGATCGAAGATGAGAACGTTCTTCTCACCAACGGTCTTCTTGTCGAGGCCA 411289 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||| ||||| || ||| ||||| | || Sbjct 411290 TAAGCGATTGCGGCGGCGGTGGGCTCGTTAATGATACGGAGGACGTTGAGGCCCGAGATG 411349 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 411350 ACACCAGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACGGTGACG 411409 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTG-GTAAG 7788 || |||| | || || | ||||| || | || ||| | || ||||| ||| | ||| Sbjct 411410 ACGGCGTTGGCAACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAAG 411469 Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848 | ||| || ||||| || |||| | ||||| || || || || | || || || Sbjct 411470 -ATCATGGACGAAATTTCCTCAGGGGTGAACTGCTTGGTCTCGCCTCGGTACTCGACCTC 411528 Query 7849 AATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 || | ||| || | || | || ||||| | | ||| | ||||| ||| Sbjct 411529 GATGACGGGCTT---GGTTGCCTTGTCGACGACCTTGAAGGGCCAGTGCTTCATGTCGGA 411585 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 || |||| || |||||| |||||||| ||||| ||||| ||||| ||||| Sbjct 411586 CTGAACCTCGGCATCGCCCCACTTTCGGCCGATAAGTCGCTTGGCATCGAAAACGGTGTT 411645 >seq20 Length=1861728 Score = 132 bits (146), Expect = 6e-26 Identities = 226/327 (69%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||| ||| || || || |||||||| ||||||||||| ||| Sbjct 546816 TCGAAGTCCTCACCACCCAGGTGGGTGTCACCGGCGGTCGCCAAGACTTCAAAGACACCG 546875 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | ||| ||||| || || || || || || || ||| || | | Sbjct 546876 TCCTCGATCGAAAGGAGCGAGACATCGAAAGTTCCTCCTCCGAGATCGTAAACGATGATG 546935 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| || |||||||| ||||| || || || || || || Sbjct 546936 TTGCGCTCGCCCCC---GGTCTTGTCAAGACCGTAAGCGATCGCGGCGGCGGTGGGCTCG 546992 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | ||| || ||| || || || || || | || || || || |||||||| Sbjct 546993 TTGACGACACGGAGGACGTTAAGACCGGCGATCGTGCCGGCGTCCTTGGTGGCTTGTCGC 547052 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||| ||||| || ||||| |||| ||||| ||||| || | Sbjct 547053 TGAGCGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 547112 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 547113 TAGGCCTCGGCGGTCTCCTTCATCTTG 547139 >seq7 Length=2982376 Score = 107 bits (118), Expect = 2e-18 Identities = 116/153 (76%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || |||||||| || ||||| Sbjct 1363914 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACGTAAGAGGGGGT 1363858 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 1363857 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 1363798 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 1363797 GCAAGAGTAGGTGGTTCCGAGATCGATACCTAT 1363765 >seq17 Length=1177576 Score = 102 bits (112), Expect = 1e-16 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 ||| |||||||| |||| || || || || || || || || | ||| || || || Sbjct 882371 ATCAAGACCGTAGGCGAGCGCGGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCGAG 882312 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 ||||| || || | ||||| || ||||||||||| ||||| ||||| |||||||| || Sbjct 882311 ACCAGCGATCGTACCAGCATCCTTGGTCGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGG 882252 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| ||| ||||| || ||| || | || ||||| Sbjct 882251 GACGGTGACGACGGCTTGCTTGACCGACTTTCCGAGGTATCCTTCTGCAGTCTCCTTCAT 882192 Query 7780 TTTG 7783 ||| Sbjct 882191 CTTG 882188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132609460160