Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq6 116 4e-21 seq2 98.7 1e-15 >seq6 Length=2534666 Score = 116 bits (128), Expect = 4e-21 Identities = 242/356 (68%), Gaps = 6/356 (2%) Strand=Plus/Minus Query 168241 TTGAGAATGAGACCCTTGATATGGCTTCCATCATTATCTGCGTCTGTCATGATCATGAGA 168300 |||| || ||||||||||| || |||||| | ||| || | |||||||||||| Sbjct 1950989 TTGATGATTAGACCCTTGATGTGAGATCCATCGTGATCCTGATCGGCCATGATCATGAGC 1950930 Query 168301 CGACCATAACGAAGTTCGGAAACATCTTTGTACTCCTTTCCTTGTTGAAGTCCCAAAATT 168360 |||||||| || | || || ||||| |||| || || || || ||||||||| Sbjct 1950929 TTGCCATAACGGAGCGAGTCGACGTCGGTGTACACCTTGCCCTGCTGCAGACCCAAAATT 1950870 Query 168361 TTCTTGAGATCATTGAACTCCTGATTAGATGTCAACTG--TGCCACCGATGAGTCCCTCA 168418 | ||||| | | || ||| ||| |||| |||| || | || | || Sbjct 1950869 TGCTTGATCGCTTGGATCTCAGCATTGTCGAGCAACGCCTTGCCCGCG--GCTTCGCGCA 1950812 Query 168419 CGTTTTTACACTTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGA 168478 |||| |||| || || || || || || ||||| | |||| ||| |||||||| | Sbjct 1950811 CGTTGAGCAACTTCCCTCGCAGAGGGAAAACACCATAGTTGTCTCGACCGACGACGGACA 1950752 Query 168479 GACCAGCGACAGCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTC 168538 |||| | ||| ||||| | || || ||||| || || |||| |||||| || || || | Sbjct 1950751 GACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCAGTCAAGATGAGCGTGCAATT-C 1950693 Query 168539 CAGACTGTGC-CGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACCAGTGAT 168593 | | | | ||| ||||| ||||||||||| |||| ||| | ||| ||||| Sbjct 1950692 GACCCGTTCCTCGTTCCAGCGTTGTTCGCATCTTCCAGCTTGACCAAACCCGTGAT 1950637 >seq2 Length=936589 Score = 98.7 bits (108), Expect = 1e-15 Identities = 264/401 (66%), Gaps = 2/401 (0%) Strand=Plus/Minus Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || || || ||||||||||| ||| ||| || | |||||||| ||||| || | Sbjct 4198 ATCTCGGTGCACAAGTTGGACGACTTGATGGTGCCGAGATTCTTCTGGTTCGACTTCTTG 4139 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 || || ||||| ||||||||| | ||| |||| || || ||| | || ||| || Sbjct 4138 TTCGCGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGGATC 4079 Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 || | ||| | | | || ||||||| || || || | || |||| ||||||||| Sbjct 4078 GCGTACCAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCTCGGCCCTCCTTCTCGTACTT 4020 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 ||||| | || |||| || || || || |||||| |||| | |||| Sbjct 4019 TTCAAACAAGACGCGGAACTCCTCGCCATAGACCTCGTGGAGACCCGGTGCCTCGGCGGG 3960 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 ||||| |||| ||| | || | |||| || | || |||||| || || || ||||| Sbjct 3959 GCAGAACAGGGGCCAGTCACCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGGATCCA 3900 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 | ||| |||| || || || || | || || | || ||||| ||| || || Sbjct 3899 GAGCGCGAAGAAGAGATCGCGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTC 3840 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGA 110740 | || || | || || | |||||| || ||||| |||| Sbjct 3839 GAGGAACTCAAAGACGTCGGCGTGCCACGGCTCGAGGTAGA 3799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975823307200