Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq10 102 5e-17
seq23 86.0 4e-12
seq13 86.0 4e-12
>seq10
Length=1653987
Score = 102 bits (112), Expect = 5e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| || || ||||| || |||| ||| | || |||| || |||||||| || |||||
Sbjct 915328 TCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAG 915387
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || || ||||| | || | ||||||||||| |||||| ||||||
Sbjct 915388 ATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGCTTTGACATTG 915447
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || | ||| || |||| ||| ||||| || ||||| |||||||| |||
Sbjct 915448 TCAATCGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACA 915507
Query 34971 AAGATCTGCAT 34981
||||| |||||
Sbjct 915508 AAGATTTGCAT 915518
>seq23
Length=1006473
Score = 86.0 bits (94), Expect = 4e-12
Identities = 151/217 (70%), Gaps = 5/217 (2%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCAT 34830
|||||||| | || || || || ||||| || || | |||| | || |||| |
Sbjct 106611 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAAG--TGCGGCCATCCT 106554
Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890
| ||||| || ||||| || || | ||||||||||||| |||| | || ||||||||
Sbjct 106553 CGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTT 106494
Query 34891 TAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||| |||||| | |||| || | ||| || |||| ||| || || |
Sbjct 106493 GGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCT 106434
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT-ATTCG 34986
| ||||| |||||||| || ||||| ||| | |||||
Sbjct 106433 TGCCCGTAAGAGTCTTGACGAAGATTTGCCTGATTCG 106397
>seq13
Length=1203898
Score = 86.0 bits (94), Expect = 4e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||||| ||| || ||||| ||||| ||||| | || | || |||| ||
Sbjct 755861 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTCGGGTGCGACCATCTTCG 755802
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || ||||| || || ||||||||||||||| | || | ||||||||||| |
Sbjct 755801 AGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 755742
Query 34893 ATCTT 34897
|||||
Sbjct 755741 ATCTT 755737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633505044672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |