Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq10 102 5e-17 seq23 86.0 4e-12 seq13 86.0 4e-12 >seq10 Length=1653987 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || || ||||| || |||| ||| | || |||| || |||||||| || ||||| Sbjct 915328 TCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAG 915387 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | ||||||||||| |||||| |||||| Sbjct 915388 ATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTGGCTTTGACATTG 915447 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| ||| ||||| || ||||| |||||||| ||| Sbjct 915448 TCAATCGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACA 915507 Query 34971 AAGATCTGCAT 34981 ||||| ||||| Sbjct 915508 AAGATTTGCAT 915518 >seq23 Length=1006473 Score = 86.0 bits (94), Expect = 4e-12 Identities = 151/217 (70%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCAT 34830 |||||||| | || || || || ||||| || || | |||| | || |||| | Sbjct 106611 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAAG--TGCGGCCATCCT 106554 Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890 | ||||| || ||||| || || | ||||||||||||| |||| | || |||||||| Sbjct 106553 CGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTT 106494 Query 34891 TAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| |||||| | |||| || | ||| || |||| ||| || || | Sbjct 106493 GGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCT 106434 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT-ATTCG 34986 | ||||| |||||||| || ||||| ||| | ||||| Sbjct 106433 TGCCCGTAAGAGTCTTGACGAAGATTTGCCTGATTCG 106397 >seq13 Length=1203898 Score = 86.0 bits (94), Expect = 4e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| ||| || ||||| ||||| ||||| | || | || |||| || Sbjct 755861 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTCGGGTGCGACCATCTTCG 755802 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || ||||||||||||||| | || | ||||||||||| | Sbjct 755801 AGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGA 755742 Query 34893 ATCTT 34897 ||||| Sbjct 755741 ATCTT 755737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633505044672