Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 174 2e-38 seq8 134 2e-26 >seq2 Length=936589 Score = 174 bits (192), Expect = 2e-38 Identities = 557/856 (65%), Gaps = 11/856 (1%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| ||||| ||||||||||| | | ||||| || || Sbjct 3401 CCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACAGTCATGACATCGAGCGCGT 3460 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || | ||| || |||||| | | |||| ||||| | || || ||||| Sbjct 3461 CCTGCAGTCGTACAACCTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTT 3520 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || ||||| || |||||| | || |||||| | || | | ||||| || Sbjct 3521 CAACGCCGGTACGCCCCACCCGCAGCTCTCGTCGTGCTTCTTGGTCACGATGAAGGACGA 3580 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| ||| | || ||||| | || || | | ||| |||| ||||| ||| || || Sbjct 3581 CTCGATCGAAGGCATCTACGATACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 3640 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA-TTCG-GGGGACA 75508 || || || || |||||| | | | || | |||||| ||| ||||| Sbjct 3641 TGGCATCGGCTTGAGCATCCACAACATCCGCGCGA--CCGGCTCGTACATCGCCGGGACG 3698 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || | || | || || | || ||||| ||||| | ||| ||| || ||||| Sbjct 3699 AACGGCTACTCGAACGGCATCGTCCCCATGCTCCGCGTCTACAACAACACCGCACGCTAC 3758 Query 75569 GTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624 || | |||| | ||| ||| ||| | | || ||||| | || || ||||| Sbjct 3759 GTCGACCAAG-GTGGCAACAAGCGCCCCGGGGCTTTTGCCATCTACCTCGAGCCGTGGCA 3817 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 ||||| || | |||||||| || | || ||||| || | || || | || Sbjct 3818 CGCCGACGTCTTTGAGTTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGC 3877 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | |||||||| | | || ||||| || || || |||||| |||| || |||| | Sbjct 3878 TCGCGATCTCTTCTTCGCGCTCTGGATCCCCGATCTCTTCATGGAGCGTGTCGAGGCCGC 3937 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| | ||| | || ||||| || | | ||||||| |||||| ||| | || || Sbjct 3938 CGGTGACTGGCCCCTGTTCTGCCCCGCCGAGGCACCGGGTCTCCACGAGGTCTATGGCGA 3997 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 |||||| | | | | |||||| || ||||||| ||||||| ||| | || Sbjct 3998 GGAGTTCCGCGTCTTGTTTGAAAAGTACGAGAAGGAGGGCCGAGCCAAGAAGACGATCCC 4057 Query 75865 AGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923 | ||| | | ||||| | || || ||| | | ||| ||||| || | || | | Sbjct 4058 CG-CGCAAAAGCTTTGGTACGCGATCCTCGAGGCCCAGGTCGAGACCGGTAACCCCTTCA 4116 Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 |||| |||||||| || ||||||||| ||||| |||||| | || || |||||| Sbjct 4117 TGCTCTACAAGGACGCCGCGAACAAGAAGTCGAACCAGAAGAATCTCGGCACCATCAAGT 4176 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 || || | ||||| || || | |||||| | | || ||| || ||||||| Sbjct 4177 CGTCCAACTTGTGCACCGAGATCATCGAGTACTCGGCCCCCGACGAGTGCGCCGTTTGCA 4236 Query 76044 ATTTGGCATCAATCGC 76059 | ||||| || ||||| Sbjct 4237 ACTTGGCCTCGATCGC 4252 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 |||||| | ||||| ||| | || || | || || ||||||||||||||||| ||| Sbjct 329923 ATCTTCCTCGTGACGAAGGTGCGGCCACGACGGGGGGACTCGTGGTTGAAGAGGATACCG 329982 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||| | |||| ||| ||| Sbjct 329983 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACAATCCAGAAGGCGTACAAC 330042 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| || || || || || ||||||||||| ||| ||| | || || || || Sbjct 330043 TTGGCAACACCGTAAGGCGAGCGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 330102 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| ||| || || ||||||||||| Sbjct 330103 ACGACCTTGCCGTACAACTCGGAGGTCGAGGCTTGGTA 330140 >seq8 Length=1461820 Score = 134 bits (148), Expect = 2e-26 Identities = 164/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 177748 ATCTTCTTTGTGAC-AAAGT-CGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTC 177805 |||||| | ||||| ||||| |||| | || | || || ||||||||||||||||| | Sbjct 1423542 ATCTTCCTCGTGACGAAAGTGCGGC--CACGACGGGGGGACTCGTGGTTGAAGAGGATAC 1423599 Query 177806 CGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCA 177865 || ||| || ||||| | || || || ||||| || ||||||| |||| ||| || Sbjct 1423600 CGTTGCACGCGTACATGTCGTAAGACTCGCGGTAGTTCTTGACGATCCAGAACGCGTACA 1423659 Query 177866 ATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTT 177925 | |||| ||| || || || || |||| |||||| |||||||||| ||| ||||| | Sbjct 1423660 ACTTGGCGACACCGTAAGGCGAACGAGGGTGGAAGGGCGTCTCCTCAGATTGAGGAGTCT 1423719 Query 177926 CTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 | ||| || ||||||| ||| || || |||||||| || Sbjct 1423720 CGAAGACCTTGCCAAACAACTCGGAGGTCGAGGCTTGATA 1423759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569421029120