Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 4e-26
seq10 125 6e-24
seq23 116 3e-21
seq2 84.2 2e-11
>seq1
Length=554179
Score = 132 bits (146), Expect = 4e-26
Identities = 165/226 (73%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764
|||| ||||| | || || || || || || || || || ||||| || || | |||
Sbjct 255492 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCCG 255551
Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824
|||| | || | || ||| |||||||||||||| ||||| || || ||||| ||||
Sbjct 255552 ACACGATCGACAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAAC 255611
Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884
||||| | ||||| ||||| || ||||| |||||| | | | || | || || ||||
Sbjct 255612 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACCTTGGCCGACTACAACA 255671
Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
| |||||||| ||||| || |||||||| | || ||||||| ||
Sbjct 255672 TCCAAAAGGAGTCGACCCTTCACTTGGTCCTTCGCCTGCGCGGTGG 255717
>seq10
Length=1653987
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | |||||||| || || |||||||| || ||| || |
Sbjct 915290 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACGATCACGCTCGAGGTCGAATCCTCG 915231
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| ||||| || ||||| |||||
Sbjct 915230 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGATCAG 915171
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||| || || || ||||| |||||| | | | | ||||| |||
Sbjct 915170 CAGCGATTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACGCTTGCGGATTACAAC 915111
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| ||||| || || | || ||||| |||| || ||
Sbjct 915110 ATCCAAAAGGAGTCGACCCTTCATCTCGTCTTGCGCCTGCGTGGTGG 915064
>seq23
Length=1006473
Score = 116 bits (128), Expect = 3e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765
||| ||||| | || || || || || || || || || ||||| || || | ||||
Sbjct 106405 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 106464
Query 24766 CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825
||| | || | || || |||||||||||||| ||||| || || || || || ||
Sbjct 106465 CACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 106524
Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACAT 24885
||| |||||||| ||||| || ||||| |||||| | | || | ||||| |||||
Sbjct 106525 ACGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTTTGGCCGATTACAACAT 106584
Query 24886 TCAAAAGGAATCGACACTACACTTGGT 24912
|||||||| ||||| || ||||||||
Sbjct 106585 CCAAAAGGAGTCGACCCTCCACTTGGT 106611
>seq2
Length=936589
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/220 (70%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 138789 CGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC 138848
|| ||||| |||| | | ||| || || ||| ||||||| |||||| || |||||
Sbjct 4526 CGACTCGATCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGAGCCTC 4467
Query 138849 GGCGCTCTCGTACGGCAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCA 138907
|| ||| ||||||| || || | ||||||||||||||| ||||||||| || |
Sbjct 4466 GGGCGAGTCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCCAACCCTTGCACTCCGA 4408
Query 138908 CTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGAT---AGGATAATAGT 138964
|||| || || ||||| | || || |||||| || ||||| || || ||||
Sbjct 4407 TGCCGATGGGACGGTGGCGGAAGTTGGA--GTTTTGC-GCCTCGATGACGGGGTAGTAGT 4351
Query 138965 TTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTT 139004
| || |||||||| ||| || || | |||| |||||
Sbjct 4350 TGACGTCGATGATGCGGTTCAAGTTGAACGCGACGACCTT 4311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897465030720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |