Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 132 4e-26 seq10 125 6e-24 seq23 116 3e-21 seq2 84.2 2e-11 >seq1 Length=554179 Score = 132 bits (146), Expect = 4e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| ||||| | || || || || || || || || || ||||| || || | ||| Sbjct 255492 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCCG 255551 Query 24765 ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 |||| | || | || ||| |||||||||||||| ||||| || || ||||| |||| Sbjct 255552 ACACGATCGACAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAAC 255611 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||| ||||| || ||||| |||||| | | | || | || || |||| Sbjct 255612 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACCTTGGCCGACTACAACA 255671 Query 24885 TTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | |||||||| ||||| || |||||||| | || ||||||| || Sbjct 255672 TCCAAAAGGAGTCGACCCTTCACTTGGTCCTTCGCCTGCGCGGTGG 255717 >seq10 Length=1653987 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | |||||||| || || |||||||| || ||| || | Sbjct 915290 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACGATCACGCTCGAGGTCGAATCCTCG 915231 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 915230 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGATCAG 915171 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || ||||| |||||| | | | | ||||| ||| Sbjct 915170 CAGCGATTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACGCTTGCGGATTACAAC 915111 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || || | || ||||| |||| || || Sbjct 915110 ATCCAAAAGGAGTCGACCCTTCATCTCGTCTTGCGCCTGCGTGGTGG 915064 >seq23 Length=1006473 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| ||||| | || || || || || || || || || ||||| || || | |||| Sbjct 106405 GCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 106464 Query 24766 CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825 ||| | || | || || |||||||||||||| ||||| || || || || || || Sbjct 106465 CACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCA 106524 Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACAT 24885 ||| |||||||| ||||| || ||||| |||||| | | || | ||||| ||||| Sbjct 106525 ACGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTTTGGCCGATTACAACAT 106584 Query 24886 TCAAAAGGAATCGACACTACACTTGGT 24912 |||||||| ||||| || |||||||| Sbjct 106585 CCAAAAGGAGTCGACCCTCCACTTGGT 106611 >seq2 Length=936589 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 138789 CGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC 138848 || ||||| |||| | | ||| || || ||| ||||||| |||||| || ||||| Sbjct 4526 CGACTCGATCGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGAGCCTC 4467 Query 138849 GGCGCTCTCGTACGGCAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCA 138907 || ||| ||||||| || || | ||||||||||||||| ||||||||| || | Sbjct 4466 GGGCGAGTCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCCAACCCTTGCACTCCGA 4408 Query 138908 CTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGAT---AGGATAATAGT 138964 |||| || || ||||| | || || |||||| || ||||| || || |||| Sbjct 4407 TGCCGATGGGACGGTGGCGGAAGTTGGA--GTTTTGC-GCCTCGATGACGGGGTAGTAGT 4351 Query 138965 TTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTT 139004 | || |||||||| ||| || || | |||| ||||| Sbjct 4350 TGACGTCGATGATGCGGTTCAAGTTGAACGCGACGACCTT 4311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897465030720