Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq11 111 1e-19
seq10 95.1 1e-14
>seq11
Length=1446674
Score = 111 bits (122), Expect = 1e-19
Identities = 275/406 (68%), Gaps = 11/406 (3%)
Strand=Plus/Minus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261
|| ||||| || || |||||||| ||||||| || | | | ||| | ||| ||| | |
Sbjct 1133141 GGAGGGTTCTTGAGGATGAAGGTCGTGAGCTTGTG-GCGCA-TGTCGACGTTGCCACGCT 1133084
Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAG 34321
||||| || |||||| | || || ||| || | || | ||||||||| |
Sbjct 1133083 TGCCGCAGGCCTTGCAGTC---ACGGAGGATGAACTCGTCCTTGGTGATGATGAGCTCCG 1133027
Query 34322 TCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGT 34381
| || ||||| | || || ||||| ||| |||||| |||||| | || || ||||
Sbjct 1133026 TTTCGGGGTTTTTGCAAGACGCACACAGCACGAACTTGTCGATGAAGACGTCGAGAAGGT 1132967
Query 34382 CCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGA 34441
|| | | | | ||||| | |||||||||||| | |||||| | | || | ||
Sbjct 1132966 CCCGCAGTCGATTCGTCTCGTGCGCCCCGTTGACGATGTAGCGTTCGGTCTCGTCGTTGA 1132907
Query 34442 CCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTA-AATGGCCGGACGT 34500
|| || ||||| || |||||||||||| |||| || ||||| | | | || ||
Sbjct 1132906 AGGTCGCCTGGGCGCCGAGTTCGCACCCGAAGAACTTGGTTGGGTATGACGACGGGCGGT 1132847
Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560
||| || |||| |||| ||||||| | || |||||||| || |||||
Sbjct 1132846 TCAA-TGCTCGCGCGACGTCGGCCATGTTGGGAAATACGGTCTTGATACCATTGCCGCGA 1132788
Query 34561 CCTTCGACCTTGGCGCAGATGCG-CGGCATTTTGTAGCGGTAGAAC 34605
||||| | ||||| ||| ||| ||||| ||||||||||| |||
Sbjct 1132787 CCTTCAATCTTGGTCAAGA-GCGAGGGCATCTTGTAGCGGTAAAAC 1132743
>seq10
Length=1653987
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||| ||| | || ||||| ||||| ||| |||| ||| |
Sbjct 915518 ATGCAAATCTTTGTCAAGACTCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCATCG 915459
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | | || ||| |||||| ||||| || || | ||| || |||
Sbjct 915458 GACACGATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 915399
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || || | |||||| |||||||| ||||||| | | || | ||||||||||||
Sbjct 915398 CAGCGTCTCATCTTTGCGGGCAAACAGCTCGAGGATGGCCGTACGCTTGCGGATTACAAC 915339
Query 110453 ATTCAAAAAGAATCTAC 110469
|| ||||| || || ||
Sbjct 915338 ATCCAAAAGGAGTCGAC 915322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841479243832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |