Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq11 111 1e-19 seq10 95.1 1e-14 >seq11 Length=1446674 Score = 111 bits (122), Expect = 1e-19 Identities = 275/406 (68%), Gaps = 11/406 (3%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261 || ||||| || || |||||||| ||||||| || | | | ||| | ||| ||| | | Sbjct 1133141 GGAGGGTTCTTGAGGATGAAGGTCGTGAGCTTGTG-GCGCA-TGTCGACGTTGCCACGCT 1133084 Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAG 34321 ||||| || |||||| | || || ||| || | || | ||||||||| | Sbjct 1133083 TGCCGCAGGCCTTGCAGTC---ACGGAGGATGAACTCGTCCTTGGTGATGATGAGCTCCG 1133027 Query 34322 TCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGT 34381 | || ||||| | || || ||||| ||| |||||| |||||| | || || |||| Sbjct 1133026 TTTCGGGGTTTTTGCAAGACGCACACAGCACGAACTTGTCGATGAAGACGTCGAGAAGGT 1132967 Query 34382 CCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGA 34441 || | | | | ||||| | |||||||||||| | |||||| | | || | || Sbjct 1132966 CCCGCAGTCGATTCGTCTCGTGCGCCCCGTTGACGATGTAGCGTTCGGTCTCGTCGTTGA 1132907 Query 34442 CCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTA-AATGGCCGGACGT 34500 || || ||||| || |||||||||||| |||| || ||||| | | | || || Sbjct 1132906 AGGTCGCCTGGGCGCCGAGTTCGCACCCGAAGAACTTGGTTGGGTATGACGACGGGCGGT 1132847 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 ||| || |||| |||| ||||||| | || |||||||| || ||||| Sbjct 1132846 TCAA-TGCTCGCGCGACGTCGGCCATGTTGGGAAATACGGTCTTGATACCATTGCCGCGA 1132788 Query 34561 CCTTCGACCTTGGCGCAGATGCG-CGGCATTTTGTAGCGGTAGAAC 34605 ||||| | ||||| ||| ||| ||||| ||||||||||| ||| Sbjct 1132787 CCTTCAATCTTGGTCAAGA-GCGAGGGCATCTTGTAGCGGTAAAAC 1132743 >seq10 Length=1653987 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| ||| | || ||||| ||||| ||| |||| ||| | Sbjct 915518 ATGCAAATCTTTGTCAAGACTCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCATCG 915459 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | | || ||| |||||| ||||| || || | ||| || ||| Sbjct 915458 GACACGATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 915399 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | |||||| |||||||| ||||||| | | || | |||||||||||| Sbjct 915398 CAGCGTCTCATCTTTGCGGGCAAACAGCTCGAGGATGGCCGTACGCTTGCGGATTACAAC 915339 Query 110453 ATTCAAAAAGAATCTAC 110469 || ||||| || || || Sbjct 915338 ATCCAAAAGGAGTCGAC 915322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841479243832