Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq10 111 2e-19 >seq10 Length=1653987 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 || || ||||| | ||| | || || |||| || || || || || |||||||| ||| Sbjct 1138142 TGTCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 1138201 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 | |||| ||||||||| || || || || |||| || |||||||| ||||| Sbjct 1138202 GCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGG 1138261 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || ||||| || ||||| ||| || || | | || | |||||| | | || Sbjct 1138262 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCG 1138321 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||||||| || | ||||||||||||||| || || ||||| ||||||||| Sbjct 1138322 ACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1138372 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | || || || || || |||||||| ||| | |||| | Sbjct 1138385 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1138444 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| || || || || |||| || |||||||| ||||| || ||||| || ||| Sbjct 1138445 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1138504 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | |||||| | | || ||||||| || | | Sbjct 1138505 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1138564 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||||||||||||| || || ||||| ||||||||| Sbjct 1138565 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1138600 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | || || || || || |||||||| ||| | |||| | Sbjct 1138613 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1138672 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| || || || || |||| || |||||||| ||||| || ||||| || ||| Sbjct 1138673 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1138732 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | |||||| | | || ||||||| || | | Sbjct 1138733 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1138792 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||||||||||||| || || ||||| ||||||||| Sbjct 1138793 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1138828 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | || || || || || |||||||| ||| | |||| | Sbjct 1138841 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1138900 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| || || || || |||| || |||||||| ||||| || ||||| || ||| Sbjct 1138901 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1138960 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | |||||| | | || ||||||| || | | Sbjct 1138961 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139020 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||||||||||||| || || ||||| ||||||||| Sbjct 1139021 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1139056 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | || || || || || |||||||| ||| | |||| | Sbjct 1139069 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139128 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| || || || || |||| || |||||||| ||||| || ||||| || ||| Sbjct 1139129 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1139188 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | |||||| | | || ||||||| || | | Sbjct 1139189 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139248 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||||||||||||| || || ||||| ||||||||| Sbjct 1139249 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1139284 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | || || || || || |||||||| ||| | |||| | Sbjct 1139524 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139583 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| || || || || |||| || |||||||| ||||| || ||||| || ||| Sbjct 1139584 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1139643 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | |||||| | | || ||||||| || | | Sbjct 1139644 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139703 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||||||||||||| || || ||||| ||||||||| Sbjct 1139704 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1139739 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | || || || || || |||||||| ||| | |||| | Sbjct 1139752 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139811 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| || || || || |||| || |||||||| ||||| || ||||| || ||| Sbjct 1139812 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1139871 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | |||||| | | || ||||||| || | | Sbjct 1139872 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139931 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||||||||||||| || || ||||| ||||||||| Sbjct 1139932 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1139967 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | || || || || || |||||||| ||| | |||| | Sbjct 1139980 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1140039 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| || || || || |||| || |||||||| ||||| || ||||| || ||| Sbjct 1140040 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTG 1140099 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | |||||| | | || ||||||| || | | Sbjct 1140100 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1140159 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||||||||||||| || || ||||| |||||||| Sbjct 1140160 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | || || || || || |||||||| ||| | |||| | Sbjct 1139297 CGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCG 1139356 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 |||||||| || || || || |||| || |||||||| ||||| || ||||| || ||| Sbjct 1139357 TCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGG-GGAATGCCCTCCTTG 1139415 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | |||||| | | || ||||||| || | | Sbjct 1139416 TCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATC 1139475 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||||||||||||| || || ||||| ||||||||| Sbjct 1139476 GTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCATA 1139511 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 ||||| || | ||||| || || || ||||| ||||||||||| | || | Sbjct 915076 CGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCA 915135 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 || ||||| || || ||||| |||||| || |||||||| ||||| |||||||| ||| Sbjct 915136 TCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATGCCTTCCTTG 915195 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || || | | || | |||||| | || ||| || || | || | | Sbjct 915196 TCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGATTCGACCTCGAGCGTGATC 915255 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||||| |||||||| || || || || || |||||| Sbjct 915256 GTCTTACCGGTCAAGGTCTTGACAAAGATCTGCATA 915291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543853436800