Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 seq10 84.2 2e-11 >seq1 Length=554179 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||| | ||||| || | | | ||||| ||||| |||||||||||| || ||| Sbjct 255711 CGCAGGCGAAGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTG 255652 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || ||| |||||||| || |||| |||| ||||| ||||| || || || |||||| Sbjct 255651 CGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGGATGCCT 255592 Query 132023 TCTTTATC 132030 || || || Sbjct 255591 TCCTTGTC 255584 >seq10 Length=1653987 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATG-G 131960 ||||| |||||| || | ||| | | | ||||| ||||| |||||||| || | || | | Sbjct 915297 ACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATC-CGCAAGCG 915355 Query 131961 TACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 |||| ||| ||||||||||| || | | |||| ||||||||||| || || || || | Sbjct 915356 TACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATAC 915415 Query 132021 CTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGA 132080 | || || || ||| || ||| | | || | || || | | ||| || |||| Sbjct 915416 CCTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACCTCGA 915475 Query 132081 CCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || || ||||| || | || || ||||| Sbjct 915476 GGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611057016640