Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 2e-12
seq10 84.2 2e-11
>seq1
Length=554179
Score = 87.8 bits (96), Expect = 2e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
|||| ||| | ||||| || | | | ||||| ||||| |||||||||||| || |||
Sbjct 255711 CGCAGGCGAAGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTG 255652
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| ||| |||||||| || |||| |||| ||||| ||||| || || || ||||||
Sbjct 255651 CGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGGATGCCT 255592
Query 132023 TCTTTATC 132030
|| || ||
Sbjct 255591 TCCTTGTC 255584
>seq10
Length=1653987
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/223 (69%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATG-G 131960
||||| |||||| || | ||| | | | ||||| ||||| |||||||| || | || | |
Sbjct 915297 ACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATC-CGCAAGCG 915355
Query 131961 TACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGC 132020
|||| ||| ||||||||||| || | | |||| ||||||||||| || || || || |
Sbjct 915356 TACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATAC 915415
Query 132021 CTTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGA 132080
| || || || ||| || ||| | | || | || || | | ||| || ||||
Sbjct 915416 CCTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACCTCGA 915475
Query 132081 CCGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || || ||||| || | || || |||||
Sbjct 915476 GGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611057016640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |