Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq10 129 5e-25 seq23 116 3e-21 seq1 91.5 1e-13 >seq10 Length=1653987 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| || | ||| | || ||||||||| ||||||||||| || Sbjct 915064 CCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCA 915123 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || || || ||||| |||||||| || | ||| Sbjct 915124 AGCGTACGGCCATCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGGG 915183 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| ||||| ||| | |||| | | |||||| ||||| || Sbjct 915184 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGATTCGAC 915242 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||||||| ||||| ||||| || || ||||| |||||||| Sbjct 915243 CTCGAGCGTGATCGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||| || | ||| | || ||||||||| ||||||||||| || Sbjct 915292 CCACCACGCAGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCA 915351 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || ||||| || |||||||| || | ||||| ||||| | ||| Sbjct 915352 AGCGTACGGCCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGA 915411 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| ||||| || | | | | | |||||| || || ||| Sbjct 915412 ATACCCTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACC 915471 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||| | ||| || ||||| || ||||| Sbjct 915472 TCGAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 >seq23 Length=1006473 Score = 116 bits (128), Expect = 3e-21 Identities = 142/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||||||||| || || | || || |||||||| || || || Sbjct 106594 CTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 106535 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || |||||||| | || | || |||||||| |||||| ||| | || Sbjct 106534 GATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGT 106476 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| ||| || ||||| | |||||||| || ||||| | ||| || | Sbjct 106475 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 106416 Query 35724 CAAATATCTGC 35734 | || || ||| Sbjct 106415 CGAAGATTTGC 106405 >seq1 Length=554179 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| ||||||||||| || | || || |||||||| || || || Sbjct 255682 CTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGACCATCCTCGAGCTGCTTGCCGGCGAA 255623 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || || ||||| | || | || |||||||| |||| || |||| || Sbjct 255622 GATGAGACGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATC-TTGGCTTTGACGT 255564 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| || || ||||| | ||||| || || ||||| | || || | Sbjct 255563 TGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 255504 Query 35724 CAAATATCTGCA 35735 | || || |||| Sbjct 255503 CGAAGATTTGCA 255492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793464761920