Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq10 138 1e-27
seq1 136 4e-27
seq23 131 2e-25
seq13 114 1e-20
>seq10
Length=1653987
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542
|| ||| |||| ||| || | ||| | ||| || ||||| ||||| || |||||||||||
Sbjct 1138141 CTGTCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 1138200
Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602
| | | ||| || ||| |||||||| ||||| || || || | || ||||| |||||
Sbjct 1138201 GGCGAGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGG 1138260
Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|| ||||| || || || ||||| || || || ||| | ||||| ||||| ||
Sbjct 1138261 GGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTC 1138320
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || ||||| || || || ||||| ||||||||
Sbjct 1138321 GACTTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| ||||| ||||| || || || || |||||||| |||||||| || ||| || |
Sbjct 915073 AGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGG 915132
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| || || || || ||||| ||||||||||| || || ||||||||
Sbjct 915133 CCATCCTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATGCCTTCC 915192
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || ||||| ||| | ||||| || ||||| || ||||| ||
Sbjct 915193 TTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGATTCGACCTCGAGCGTG 915252
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || |||||||| || || || || || || |||||
Sbjct 915253 ATCGTCTTACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || ||||| || ||||| || |||||||||||| | | ||| ||
Sbjct 1138382 AGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGA 1138441
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || || | || ||||| ||||| || ||||| ||
Sbjct 1138442 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCC 1138501
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| ||||| || || || || |||
Sbjct 1138502 TTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTA 1138561
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || ||||| ||||||||
Sbjct 1138562 ATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || ||||| || ||||| || |||||||||||| | | ||| ||
Sbjct 1138610 AGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGA 1138669
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || || | || ||||| ||||| || ||||| ||
Sbjct 1138670 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCC 1138729
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| ||||| || || || || |||
Sbjct 1138730 TTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTA 1138789
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || ||||| ||||||||
Sbjct 1138790 ATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || ||||| || ||||| || |||||||||||| | | ||| ||
Sbjct 1138838 AGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGA 1138897
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || || | || ||||| ||||| || ||||| ||
Sbjct 1138898 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCC 1138957
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| ||||| || || || || |||
Sbjct 1138958 TTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTA 1139017
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || ||||| ||||||||
Sbjct 1139018 ATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || ||||| || ||||| || |||||||||||| | | ||| ||
Sbjct 1139066 AGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGA 1139125
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || || | || ||||| ||||| || ||||| ||
Sbjct 1139126 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCC 1139185
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| ||||| || || || || |||
Sbjct 1139186 TTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTA 1139245
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || ||||| ||||||||
Sbjct 1139246 ATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || ||||| || ||||| || |||||||||||| | | ||| ||
Sbjct 1139521 AGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGA 1139580
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || || | || ||||| ||||| || ||||| ||
Sbjct 1139581 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCC 1139640
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| ||||| || || || || |||
Sbjct 1139641 TTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTA 1139700
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || ||||| ||||||||
Sbjct 1139701 ATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || ||||| || ||||| || |||||||||||| | | ||| ||
Sbjct 1139749 AGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGA 1139808
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || || | || ||||| ||||| || ||||| ||
Sbjct 1139809 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCC 1139868
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| ||||| || || || || |||
Sbjct 1139869 TTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTA 1139928
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || ||||| ||||||||
Sbjct 1139929 ATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966
Score = 132 bits (146), Expect = 5e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || ||||| || ||||| || |||||||||||| | | ||| ||
Sbjct 1139977 AGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGA 1140036
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || || | || ||||| ||||| || ||||| ||
Sbjct 1140037 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCC 1140096
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| ||||| || || || || |||
Sbjct 1140097 TTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTA 1140156
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || ||||| ||||||||
Sbjct 1140157 ATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194
Score = 129 bits (142), Expect = 6e-25
Identities = 160/218 (73%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||||| || ||||| || ||||| || |||||||||||| | | ||| ||
Sbjct 1139294 AGGCGCAGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGA 1139353
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| |||||||| ||||| || || || | || ||||| ||||| || ||||| ||
Sbjct 1139354 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGG-GGAATGCCCTCC 1139412
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || || || ||| | ||||| ||||| || || || || |||
Sbjct 1139413 TTGTCCTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTA 1139472
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || ||||| ||||||||
Sbjct 1139473 ATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| ||||| ||||| || || || || |||||||| |||||||| || ||| || |
Sbjct 915301 AGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGG 915360
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||||||||| ||||| || | |||||| || ||||| || || || ||
Sbjct 915361 CCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCC 915420
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || |||||| ||| | ||||| || || || || ||||| ||
Sbjct 915421 TTGTCCTGAATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACCTCGAGGGTG 915480
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | ||| || || || ||||||||
Sbjct 915481 ATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518
>seq1
Length=554179
Score = 136 bits (150), Expect = 4e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || |||||||| |||||||||||| | | |||| || || ||||||||
Sbjct 255694 GTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGACCATCCTCGAGCTG 255635
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || | ||| || || |||||||| |||||||| || ||||| || ||
Sbjct 255634 CTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTT 255575
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|||||| ||| | |||||||| || || || ||||| || ||||| || || ||
Sbjct 255574 GGCTTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 255515
Query 134690 TAAAGTTTTAACGAAAATTTGCA 134712
| || || ||||| |||||||
Sbjct 255514 GAGGGTCTTGACGAAGATTTGCA 255492
>seq23
Length=1006473
Score = 131 bits (144), Expect = 2e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | || | ||| || || || |||||||| |||||||| ||| |
Sbjct 106629 CCACCTCGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCC 106570
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || |||||||| ||||| || || ||||| || ||||| || |||||
Sbjct 106569 AAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGG 106510
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || ||||| || || ||||| ||| | ||||||||||| || ||
Sbjct 106509 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 106450
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711
||||| || || || || || || | ||| || ||||| ||||||
Sbjct 106449 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACGAAGATTTGC 106405
>seq13
Length=1203898
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542
|| ||| |||| ||| || | ||| | ||| || ||||| ||||| || |||||||||||
Sbjct 755883 CTGTCCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 755824
Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602
| | |||| || || |||||||| ||||| || || || | || ||||| || ||
Sbjct 755823 GGCTCGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGG 755764
Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|| ||||| || || || ||||| || ||||| ||| | ||||| ||||| ||
Sbjct 755763 GGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTC 755704
Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695
|| || || ||||| || || ||||| || ||
Sbjct 755703 GACTTCAAGCGTAATCGTCTTGCCGGTCAAGGT 755671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398248380480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |