Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2 192 7e-44
seq8 122 1e-22
>seq2
Length=936589
Score = 192 bits (212), Expect = 7e-44
Identities = 561/856 (66%), Gaps = 11/856 (1%)
Strand=Plus/Minus
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
||||| || ||||| |||||||| || ||| || | | |||||| | || ||
Sbjct 4252 GCGATCGAGGCCAAGTTGCAAACGGCGCACTCGTCGGGGGCCGAGTACTCGATGATCTCG 4193
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || |||||||| ||| || || || | |||||| ||||| |||||||||
Sbjct 4192 GTGCACAAGTTGGACGACTTGATGGTGCCGAGATTCTTCTGGTTCGACTTCTTGTTCGCG 4133
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
|| ||||||||||||||| |||| | || ||||| ||| | | ||| || || | |
Sbjct 4132 GCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGGATCGCGTAC 4073
Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474
|||| | | || || || | | ||||| || |||||| |||||||||| |
Sbjct 4072 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCTCGGCCCTCCTTCTCGTACTTTTCAAA 4014
Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534
| | | |||||||| || | ||| |||||| ||||||| | | || |||||
Sbjct 4013 CAAGACGCGGAACTCCTCGCCATAGACCTCGTGGAGACCCGGTGCCTCGGCGGGGCAGAA 3954
Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594
|| | ||| | ||| | |||| || |||| |||||| || || || ||||| || |
Sbjct 3953 CAGGGGCCAGTCACCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGGATCCAGAGCGC 3894
Query 111595 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654
| |||||||| | | || | || || | || ||||| || | || |||||
Sbjct 3893 GAAGAAGAGATCGCGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAA 3834
Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGAC 111710
||| | || || |||||||| ||||| || |||| || | || || | | |
Sbjct 3833 CTCAAAGACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAAGCCCCGGGGCGCTTGTT 3774
Query 111711 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 111770
| ||| |||| | || ||||| || ||| ||| | ||||| ||||| || | || |
Sbjct 3773 G-CCACCTTGGTCGACGTAGCGTGCGGTGTTGTTGTAGACGCGGAGCATGGGGACGATGC 3715
Query 111771 CATCTGATTGACCATTTGTCCC-CCGA-ATACGAGATTTATTGGCTCTCACATCATGGAT 111828
| | || | || || ||||| ||| |||||| | || | | | |||||
Sbjct 3714 CGTTCGAGTAGCCGTTCGTCCCGGCGATGTACGAG--CCGGTCGCGCGGATGTTGTGGAT 3657
Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888
| || || || || || || ||| ||||| |||| ||| | | || || | ||
Sbjct 3656 GCTCAAGCCGATGCCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTATCGTA 3597
Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948
||| || | ||| ||||| ||||| | | || | |||||| || | ||||||
Sbjct 3596 GATGCCTTCGATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTG 3537
Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 112008
|| ||||| || |||||||| || || | ||||| |||| | | ||||||
Sbjct 3536 GGGCGTACCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAG 3477
Query 112009 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068
|| ||| | || || ||| || ||||| | | ||||||||||| ||||| |||||
Sbjct 3476 GTTGTACGACTGCAGGACGCGCTCGATGTCATGACTGTGGATGCCGACGGCGACACGCAT 3417
Query 112069 GAACATGTACTGTGGG 112084
|| ||||| || |||
Sbjct 3416 GAGCATGTGTTGCGGG 3401
Score = 100 bits (110), Expect = 4e-16
Identities = 222/328 (68%), Gaps = 4/328 (1%)
Strand=Plus/Minus
Query 9156 CGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAAC 9215
||| |||| |||||||| |||| ||| ||| || ||||| ||| | || || |
Sbjct 330146 CGCTTCTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCC 330087
Query 9216 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 9275
||| ||| ||||||||||| |||||| ||||| || | ||| | || |||
Sbjct 330086 GAGACGACCCCCTTCTACCCTCGCTCGCCTTACGGTGTTGCCAAGTTGTACGCCTTCTGG 330027
Query 9276 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 9335
| ||||| || ||||||||||| |||| ||| |||||| ||| ||||||||||||
Sbjct 330026 ATTGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAAC 329967
Query 9336 CATGAATCACCGAGACGAGG-TGCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATCA 9393
|| || || || | || || ||| ||| || || | |||||| | ||| | | ||
Sbjct 329966 CACGAGTCCCCCCGTCGTGGCCGCA-CCTTCGTCACGAGGAAGATCTCGCGA-GCTGTCG 329909
Query 9394 AACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAG 9453
| ||| | ||| || |||| | | || | | || ||||| | || || | |
Sbjct 329908 CCGAGATCTCGCTCGGTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTG 329849
Query 9454 ATTGGGGTCACGCGAAGGACTATGTTGA 9481
||||||| ||||| ||||| |||||
Sbjct 329848 ATTGGGGACACGCCCGTGACTACGTTGA 329821
>seq8
Length=1461820
Score = 122 bits (134), Expect = 1e-22
Identities = 139/187 (74%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 9160 TCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 9219
||||||||||||| |||| ||| ||||||| ||||| ||| | || ||| ||||
Sbjct 1423761 TCTATCAAGCCTCGACCTCCGAGTTGTTTGGCAAGGTCTTCGAGACTCCTCAATCTGAGG 1423702
Query 9220 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGGCTCG 9279
|||| |||||| |||| || ||| ||||| ||| | ||| | || ||| |||
Sbjct 1423701 AGACGCCCTTCCACCCTCGTTCGCCTTACGGTGTCGCCAAGTTGTACGCGTTCTGGATCG 1423642
Query 9280 TCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATG 9339
|||| || |||||||||||||||| ||| |||||| ||| |||||||||||||| |
Sbjct 1423641 TCAAGAACTACCGCGAGTCTTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACG 1423582
Query 9340 AATCACC 9346
| || ||
Sbjct 1423581 AGTCCCC 1423575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031811590400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |