Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2 556 1e-153 seq6 84.2 2e-11 >seq2 Length=936589 Score = 556 bits (616), Expect = 1e-153 Identities = 799/1119 (71%), Gaps = 13/1119 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||| ||| Sbjct 4525 GACTCGATC---GCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTTGCGAGCC 4469 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || | |||||||| | ||| || |||||| | ||||||| || || || || Sbjct 4468 TCGGGCGAGTCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCCAACCCTTGCACTCC 4410 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAA 78950 ||| |||| || |||||||| | |||| ||| | ||||||| | ||||| | Sbjct 4409 GATGCCGATGGGACGGTGGCGGAAGTTGGAGTTTTG---CGCCTCGATGACGGGGTAGTA 4353 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| ||||||| |||||||| ||| || ||||||| | ||||||| || || Sbjct 4352 GTTGACGTCGATGATGCGGTTCAAGTTGAACGCGACGACCTTGGCGACCTCGTGCAGCTT 4293 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 ||| ||| | | | | ||| |||||| |||| | | ||| |||| ||||| Sbjct 4292 CTTGAAGTCATACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 4234 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| |||||| ||| || ||||||||| || |||||||| || ||||||| Sbjct 4233 AAACGGCGCACTCGTCGGGGGCCGAGTACTCGATGATCTCGGTGCACAAGTTGGACGACT 4174 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||||||||||| ||||||||||| ||||| ||| ||||||||||||| |||| Sbjct 4173 TGATGGTGCCGAGATTCTTCTGGTTCGACTTCTTGTTCGCGGCGTCCTTGTAGAGCATGA 4114 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | |||||||| ||||| || ||| | ||| ||| | | | || ||| Sbjct 4113 AGGGGTTACCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAAAGCTTTTGCGCGGGGA 4054 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 ||||||| || |||| ||||| | |||| || ||| |||| | Sbjct 4053 TCGTCTTCTTGGCTCGGCCCTCCTTCTCGTACTTTTCAAACAAGACGCGGAACTCCTCGC 3994 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 ||||||| ||| | || ||||| |||| ||||| | |||| ||||||| || | Sbjct 3993 CATAGACCTCGTGGAGACCCGGTGCCTCGGCGGGGCAGAACAGGGGCCAGTCACCGGCGG 3934 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || |||||||||||| || |||||||| || || |||||| ||||| | Sbjct 3933 CCTCGACACGCTCCATGAAGAGATCGGGGATCCAGAGCGCGAAGAAGAGATCGCGAGCGC 3874 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| |||||| || || ||||| || || | || ||||||||||| Sbjct 3873 GGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTCAAAGACGTCGGCGTGCC 3814 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 ||||||| || |||||||| || | || ||||||| ||| || |||| |||||| | Sbjct 3813 ACGGCTCGAGGTAGATGGCAAAAGCCCCGGGGCGCTTGTTGCCACCTTGGTCGACGTAGC 3754 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | || ||||||||| | || ||||||||||| |||||||||| | | ||||||||||| Sbjct 3753 GTGCGGTGTTGTTGTAGACGCGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTCC 3694 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || ||| | ||| |||| || ||||| | | | |||||||| |||| Sbjct 3693 CGGCGATGTACGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAGCCGATGCCACCGGCGG 3634 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||| Sbjct 3633 TCTTGGAGATGAGCGCGCACGTCTTGAGCGTATCGTAGATGCCTTCGATCGAGTCGTCCT 3574 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||| |||||| ||| | ||| |||| | |||||||||||||||||| | Sbjct 3573 TCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGGGGCGTACCGGCGTTGAAGAGCG 3514 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| |||||| | | | ||| || | ||||| || | ||||||| Sbjct 3513 TCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTGTACGACTGCAGGACGCGCT 3454 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 || ||| | | |||||||||||| ||||| ||||||| Sbjct 3453 CGATGTCATGACTGTGGATGCCGACGGCGACACGCATGA 3415 Score = 466 bits (516), Expect = 2e-126 Identities = 771/1105 (70%), Gaps = 6/1105 (1%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| ||||| ||||||||||| | | ||| || ||| |||| || | ||| Sbjct 3415 TCATGCGTGTCGCCGTCGGCATCCACAGTCATGACATCGAGCGCGTCCTGCAGTCGTACA 3474 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| | || | |||||| ||||| ||||||| || ||||||||||||||| Sbjct 3475 ACCTCATGTCCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTCAACGCCGGTACGC 3534 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 | |||||||| | ||| || ||| | || | |||||||| ||| || || |||| Sbjct 3535 CCCACCCGCAGCTCTCGTCGTGCTTCTTGGTCACGATGAAGGACGACTCGATCGAAGGCA 3594 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 ||||||| ||||||||| |||||||| |||||||||| |||| || ||||| | Sbjct 3595 TCTACGATACGCTCAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGCATCGGCTTGA 3654 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCG-AC 19414 | | || ||||| ||| || | ||| ||||||||||| || || || Sbjct 3655 GCATCCACAACATCCGCGCGACCGGCTCGTACATCGCCGGGACGAACGG-CTACTCGAAC 3713 Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 || |||||||| ||||||||||||| ||||||||| || | |||||| |||| || ||| Sbjct 3714 GGCATCGTCCCCATGCTCCGCGTCTACAACAACACCGCACGCTACGTCGACCAAGGTGGC 3773 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| ||| || | || ||||||||||||||||| |||||||| |||||| | || Sbjct 3774 AACAAGCGCCCCGGGGCTTTTGCCATCTACCTCGAGCCGTGGCACGCCGACGTCTTTGAG 3833 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 |||||||| || ||| |||||| || | ||||| | ||| |||||| |||||| Sbjct 3834 TTCCTCGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCGCGATCTCTTCTTC 3893 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 || | ||||| || || || ||||||||| || ||| | || || |||| |||| Sbjct 3894 GCGCTCTGGATCCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGGTGACTGGCCCCTG 3953 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714 | ||||| ||| || || || | ||| ||||| ||||||| |||| | ||| Sbjct 3954 TTCTGCCCCGCCGAGGCACCGGGTCTCCACGAGGTCTATGGCGAGGAGTTCCGCGTCTTG 4013 Query 19715 TACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGG 19774 | | |||| ||||||| ||||||| | ||| || | | | ||| Sbjct 4014 TTTGAAAAGTACGAGAAGGAGGGCCGAGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGG 4073 Query 19775 GACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833 | |||| ||||| | ||||||||||||||| | || | |||| |||||||||||| Sbjct 4074 TA-CGCGATCCTCGAGGCCCAGGTCGAGACCGGTAACCCCTTCATGCTCTACAAGGACGC 4132 Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893 ||||||| ||||| || |||||||| ||||| | ||||||||||||||| |||| || Sbjct 4133 CGCGAACAAGAAGTCGAACCAGAAGAATCTCGGCACCATCAAGTCGTCCAACTTGTGCAC 4192 Query 19894 TGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTG 19953 || ||||| ||| || || |||||| ||||| || || |||| || | Sbjct 4193 CGAGATCATCGAGTACTCGGCCCCCGACGAGTGCGCCGTTTGCAACTTGGCCTCGATCGC 4252 Query 19954 CCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCG 20013 |||||| ||| ||||| | | | ||||| || || ||||||| || Sbjct 4253 GTTGCCGAGCTTCATCAAGAACGGCGTGTATGACTTCAAGAAGCTGCACGAGGTCGCCAA 4312 Query 20014 GGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCGAGGCGGC 20073 ||||||| || || |||| ||| ||||||| |||| ||||| | | ||| Sbjct 4313 GGTCGTCGCGTTCAACTTGAACCGCATCATCGACGTCAACTACTACCCCGTCATCGAGGC 4372 Query 20074 GCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGT 20133 || || || || | |||||||| || |||| ||||| || || || ||||||||| Sbjct 4373 GCAAAACTCCAACTTCCGCCACCGTCCCATCGGCATCGGAGTGCAAGGGTTGGCCGACGC 4432 Query 20134 TTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCA 20192 |||||| || ||| | | |||||| ||| |||| ||| ||||||||||| | Sbjct 4433 GTTCATG-GCCTTGGCGATGCCGTTCGACTCGCCCGAGGCTCGCAAGCTCAACAAGCAGA 4491 Query 20193 TCTTCGAGGCCGTGTACCACGCGGC 20217 |||||||| || | |||||||| || Sbjct 4492 TCTTCGAGACCATCTACCACGCTGC 4516 Score = 141 bits (156), Expect = 1e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 78184 GCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGC 78243 ||||| || ||||| ||||||||||||||||| | || |||||| ||||| | |||| Sbjct 5331 GCGCGCGTGCGCAAGTAGTACATGCCCGTCTTCAATCCTCGCTTCCAGCCGTAGAAGTGC 5272 Query 78244 ATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGG 78303 || || || | |||| |||| || || | |||||||||||| || || ||| Sbjct 5271 ATCGACGTGAGTTGCGCCATCGTCGGACTCGACAAGTGGATGTTGAGCGATTGCGATTGG 5212 Query 78304 TCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAG 78363 |||||| | ||||| |||||||| | || ||| |||| || |||||||| | ||||||| Sbjct 5211 TCGATGAAGGCACCTCGGTCGGCGGACAAGTCAATGATCGTCTTTTGCGAGAGCTCCCAG 5152 Query 78364 ATGGTCCGGTAAATGGCCTTCAGCTC 78389 | |||| ||| |||||||| || || Sbjct 5151 ACGGTCTTGTAGATGGCCTTGAGATC 5126 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| ||||| ||| || | Sbjct 5129 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACGATCATTGACTTGTCC 5188 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || || |||| ||||||||| || || |||||||| || | || || |||| Sbjct 5189 GCCGACCGAGGTGCCTTCATCGACCAATCGCAATCGCTCAACATCCACTTGTCGAGTCCG 5248 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| | || | || ||||| | ||||||||| | || | ||||||||| Sbjct 5249 ACGATGGCGCAACTCACGTCGATGCACTTCTACGGCTGGAAGCGAGGATTGAAGACGGGC 5308 Query 20798 ATGTACTATCTGCGGACCCGAGC 20820 |||||||| |||| || || || Sbjct 5309 ATGTACTACTTGCGCACGCGCGC 5331 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||| ||| | ||||| || ||| ||| Sbjct 55400 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGAGGCTTGATGCCCGGATTGACCTTC 55341 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||| ||||| Sbjct 55340 TCCAACGAGCTCATCTCGCGTGACGAGGGTCTCCA 55306 >seq6 Length=2534666 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 || |||||||||||||| || || |||||||| || ||| | ||||||||||| || || Sbjct 1721674 ATCTTCTGGCTCAAAAAACGAGGTCTCATGCCCGGACTGTGCTTCTCCAACGAACTCATA 1721615 Query 60099 TCCCGGGACGAGGGCCTCCAT 60119 ||||| ||||| ||||| ||| Sbjct 1721614 TCCCGCGACGAAGGCCTTCAT 1721594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524635442560