Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq2 109 4e-19 >seq2 Length=936589 Score = 109 bits (120), Expect = 4e-19 Identities = 186/270 (69%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30246 || |||||| || || ||||| || || || || | | ||||||| |||||||| Sbjct 266922 CAACTGATCGACGCCTTCCCCCGTATAATCGTCCTTCGCGGTCCTGTACTCGGCTCCGAA 266981 Query 30247 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30306 |||||||||||||||||| || || || |||| || || | || | |||| || || Sbjct 266982 ATGCCTCCACTGGAACCCATAAACGGGACCCAAATCGCCTTGCTCGCGATGCTTCAATCC 267041 Query 30307 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGA 30366 ||||||||| || | || || || || | ||||| ||||| || || || || || Sbjct 267042 GAGCTTGTCCAAGAATTGCCTCGATCCATTCCCATCCCAAATCTTGACGCCATTGTCGGA 267101 Query 30367 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30426 | || || | || || |||| |||||||| |||| |||||| | || | | Sbjct 267102 CAAGAGGTTCGAATCCGTCGATCCTCGAACGAACCAGAGCAACTCCTCGATGATGCCACG 267161 Query 30427 CCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | || ||| |||||||||| | ||||| Sbjct 267162 CGTGAACACCTTCTTGGTCGTCAAAAGGGG 267191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310281154208