Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 3e-13 >seq10 Length=1653987 Score = 89.7 bits (98), Expect = 3e-13 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || ||||| || | ||| || || ||||||||| ||||| ||||| | ||| || || Sbjct 915301 AGGCGCAAGACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGG 915360 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || ||||| || ||||| || | |||||||||||| || || | |||||| Sbjct 915361 CCATCCTCGAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCC 915420 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCT--CTCCACTTCCACG 34665 ||||| ||| || | ||| || | ||| ||||| || | ||| || || | | Sbjct 915421 TTGTC-CTGAATCTTGGCTTTGACATTGTCAATCGTGTC--CGATGACTCGACCTCGAGG 915477 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || | || || ||||| || ||||| Sbjct 915478 GTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||||| ||||| | |||||| || || ||| |||||| || ||||| || || | Sbjct 1138145 CCGCCTCGGAGACGAAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 1138204 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || || || ||||| || || | || || ||||| || || Sbjct 1138205 AGAGTGCGACCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGA 1138264 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| || | ||||| | ||| ||||| ||| || Sbjct 1138265 ATGCCCTCCTTGTC-CTGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGAC 1138323 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || ||||| || ||||| || || || || || || ||||| Sbjct 1138324 TTCAAGCGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729507941592