Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq10 136 3e-27 seq1 132 4e-26 seq23 123 2e-23 seq13 113 4e-20 >seq10 Length=1653987 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || |||||| | || || || || || || | || Sbjct 915518 ATGCAAATCTTTGTCAAGACTCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCATCG 915459 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | |||||| || ||||| ||||| || || || || ||||| ||| Sbjct 915458 GACACGATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 915399 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || |||||||| | || || | || || | ||||||||| Sbjct 915398 CAGCGTCTCATCTTTGCGGGCAAACAGCTCGAGGATGGCCGTACGCTTGCGGATTACAAC 915339 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||||||| | ||| | || ||||| |||| ||||| || Sbjct 915338 ATCCAAAAGGAGTCGACCCTTCATCTCGTCTTGCGCCTGCGTGGTGGTAT 915289 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||||| ||| | || || || || || ||| | || Sbjct 915290 ATGCAGATCTTTGTCAAGACCTTGACCGGTAAGACGATCACGCTCGAGGTCGAATCCTCG 915231 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| |||||||| || || ||||| Sbjct 915230 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGATCAG 915171 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| || || || | || || | || || | ||||||||| Sbjct 915170 CAGCGATTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACGCTTGCGGATTACAAC 915111 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||||||| | ||| | || ||||| |||| ||||| Sbjct 915110 ATCCAAAAGGAGTCGACCCTTCATCTCGTCTTGCGCCTGCGTGGTGG 915064 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | ||||| |||||||| || |||| Sbjct 1138599 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138540 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||| || ||||| || ||||| || Sbjct 1138539 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138480 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | |||||| || || | |||| |||||| Sbjct 1138479 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138420 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || |||| |||| ||||| || Sbjct 1138419 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGTAT 1138370 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | ||||| |||||||| || |||| Sbjct 1138827 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138768 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||| || ||||| || ||||| || Sbjct 1138767 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138708 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | |||||| || || | |||| |||||| Sbjct 1138707 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138648 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || |||| |||| ||||| || Sbjct 1138647 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGTAT 1138598 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | ||||| |||||||| || |||| Sbjct 1139055 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138996 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||| || ||||| || ||||| || Sbjct 1138995 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138936 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | |||||| || || | |||| |||||| Sbjct 1138935 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138876 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || |||| |||| ||||| || Sbjct 1138875 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGTAT 1138826 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | ||||| |||||||| || |||| Sbjct 1139283 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139224 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||| || ||||| || ||||| || Sbjct 1139223 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1139164 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | |||||| || || | |||| |||||| Sbjct 1139163 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139104 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || |||| |||| ||||| || Sbjct 1139103 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGTAT 1139054 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | ||||| |||||||| || |||| Sbjct 1139738 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139679 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||| || ||||| || ||||| || Sbjct 1139678 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1139619 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | |||||| || || | |||| |||||| Sbjct 1139618 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139559 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || |||| |||| ||||| || Sbjct 1139558 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGTAT 1139509 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | ||||| |||||||| || |||| Sbjct 1139966 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139907 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||| || ||||| || ||||| || Sbjct 1139906 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1139847 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | |||||| || || | |||| |||||| Sbjct 1139846 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139787 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || |||| |||| ||||| || Sbjct 1139786 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGTAT 1139737 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | ||||| |||||||| || |||| Sbjct 1140194 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1140135 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||| || ||||| || ||||| || Sbjct 1140134 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1140075 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | |||||| || || | |||| |||||| Sbjct 1140074 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1140015 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || |||| |||| ||||| || Sbjct 1140014 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGTAT 1139965 Score = 127 bits (140), Expect = 2e-24 Identities = 167/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | ||||| |||||||| || |||| Sbjct 1139510 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1139451 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||| || ||||| || ||||| || Sbjct 1139450 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCC-CCCGACCAG 1139392 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | |||||| || || | |||| |||||| Sbjct 1139391 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1139332 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || |||| |||| ||||| || Sbjct 1139331 ATCCAGAAGGAGTCGACGCTCCATCTCGTCCTGCGCCTGCGTGGTGGTAT 1139282 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||||||| | ||||| |||||||| || |||| Sbjct 1138371 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCG 1138312 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || ||||| ||||| || ||||| || ||||| || Sbjct 1138311 GACACGATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 1138252 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||||||||| || | |||||| || || | |||| |||||| Sbjct 1138251 CAACGACTCATCTTCGCCGGCAAGCAGCTCGAAGACGGTCGCACTCTCGCCGACTACAAC 1138192 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| ||| | || ||||| | ||| | || || || Sbjct 1138191 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTTCGTCTCCGAGGCGG 1138145 >seq1 Length=554179 Score = 132 bits (146), Expect = 4e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 26989 TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCG 27048 |||| || || || || || || || |||||| | || || || || || || | |||| Sbjct 255492 TGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCTTCCG 255551 Query 27049 ACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAAC 27108 || |||| || | |||||| || || |||||||| |||||||| || ||||| |||| Sbjct 255552 ACACGATCGACAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAAC 255611 Query 27109 AGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACA 27168 | ||| | || | ||||||||| || | || || || ||| | |||| ||||||| Sbjct 255612 AACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACCTTGGCCGACTACAACA 255671 Query 27169 TTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 | ||||||||||||||| | || ||||| | || |||| ||||| Sbjct 255672 TCCAAAAGGAGTCGACCCTTCACTTGGTCCTTCGCCTGCGCGGTGG 255717 >seq23 Length=1006473 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 || ||| || || || || ||||| || |||||| | || || || || || || |||| Sbjct 106402 CAGGCAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 106461 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| || | ||||| || || |||||||| |||||||| || || || || Sbjct 106462 CGACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCA 106521 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || || || || | ||||||||| || | || || | || | |||||||||| Sbjct 106522 GCAACGATTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTTTGGCCGATTACAA 106581 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||||||||||||| | || ||||| | ||| | || ||||| || Sbjct 106582 CATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGTCTCCGAGGTGGTAT 106632 >seq13 Length=1203898 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||||||| | ||||| |||||||| || |||| ||| ||||||| | ||||| Sbjct 755675 TGACCGGCAAGACGATTACGCTTGAAGTCGAGTCGTCGGACACGATTGACAATGTCAAGG 755734 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || ||||| ||||| || ||||| || || || || || || | || | |||||||| Sbjct 755735 CCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAACGACTCATCTTCGCCGGCA 755794 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 | || | ||||| || ||| |||| |||||||| || |||||||| ||| | | Sbjct 755795 AGCAGCTCGAAGATGGTCGCACCCGAGCCGACTACAACATCCAGAAGGAGTCCACCCTTC 755854 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGG 27214 | ||||| | ||| | || || || Sbjct 755855 ACTTGGTGCTTCGTCTCCGAGGCGG 755879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918269524480