Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq10 181 2e-40 seq1 178 3e-39 seq23 163 7e-35 seq13 132 1e-25 seq2 84.2 5e-11 >seq10 Length=1653987 Score = 181 bits (200), Expect = 2e-40 Identities = 166/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| || ||||| || ||||| ||||||||||| ||||||||||| || | ||||| || Sbjct 915081 GACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTC 915140 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 |||||||| || |||||||| | || || || |||||||| | |||||||||||||| Sbjct 915141 GAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGATCAGGAGGGATGCCTTCCTTGTCCTG 915200 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||||| || ||||| ||||| ||||| ||| ||| |||||||| ||||||||||| Sbjct 915201 AATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGATTCGACCTCGAGCGTGATCGTCTT 915260 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | ||||| ||||| | |||||| Sbjct 915261 ACCGGTCAAGGTCTTGACAAAGATCTGCAT 915290 Score = 172 bits (190), Expect = 1e-37 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| || ||||| || ||||| ||||||||||| ||||||||||| || | ||||| || Sbjct 915309 GACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGCGTACGGCCATCCTC 915368 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 ||||| ||||| || ||||| || || |||||||| || |||| || ||||||||||| Sbjct 915369 GAGCTGTTTGCCCGCAAAGATGAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTG 915428 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||||| ||| || || || || ||||| || || |||||||| ||||| ||||| Sbjct 915429 AATCTTGGCTTTGACATTGTCAATCGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTT 915488 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| ||||| | ||||| Sbjct 915489 GCCCGTAAGAGTCTTGACAAAGATTTGCAT 915518 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| |||||||| || |||||||| || || || || || | || ||| Sbjct 1138160 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCT 1138219 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 1138220 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1138279 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 1138280 TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 1138339 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 1138340 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138371 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || |||||||| || || || || || | || ||| Sbjct 1138388 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCT 1138447 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 1138448 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1138507 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 1138508 TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 1138567 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 1138568 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138599 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || |||||||| || || || || || | || ||| Sbjct 1138616 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCT 1138675 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 1138676 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1138735 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 1138736 TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 1138795 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 1138796 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1138827 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || |||||||| || || || || || | || ||| Sbjct 1138844 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCT 1138903 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 1138904 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1138963 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 1138964 TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 1139023 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 1139024 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139055 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || |||||||| || || || || || | || ||| Sbjct 1139072 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCT 1139131 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 1139132 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1139191 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 1139192 TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 1139251 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 1139252 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139283 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || |||||||| || || || || || | || ||| Sbjct 1139527 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCT 1139586 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 1139587 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1139646 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 1139647 TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 1139706 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 1139707 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139738 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || |||||||| || || || || || | || ||| Sbjct 1139755 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCT 1139814 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 1139815 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1139874 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 1139875 TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 1139934 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 1139935 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139966 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || |||||||| || || || || || | || ||| Sbjct 1139983 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCT 1140042 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 1140043 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1140102 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 1140103 TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 1140162 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 1140163 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1140194 Score = 127 bits (140), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || |||||||| || || || || || | || ||| Sbjct 1139300 AGGACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGACCGTCT 1139359 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 1139360 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTC-GGGGGAATGCCCTCCTTGTCC 1139418 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 1139419 TGAATCTTGGCCTTAACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 1139478 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | ||||| Sbjct 1139479 TTGCCGGTCAAGGTCTTGACGAAGATTTGCAT 1139510 >seq1 Length=554179 Score = 178 bits (196), Expect = 3e-39 Identities = 166/211 (79%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || ||||| ||||||||||| || || || | ||| | ||||| Sbjct 255702 AGGACCAAGTGAAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGACCATCC 255643 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||||||||| || || | ||||||||||| Sbjct 255642 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCT 255583 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| ||||| ||||| ||||| || || |||||||| ||||| ||| Sbjct 255582 TGGATCTTGGCTTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTC 255523 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCA 211113 || |||||||| ||||| || || | |||| Sbjct 255522 TTGCCCGTGAGGGTCTTGACGAAGATTTGCA 255492 >seq23 Length=1006473 Score = 163 bits (180), Expect = 7e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| ||||||||||| ||||| || | || | ||||| Sbjct 106614 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAATCGGCCAAAGTGCGGCCATCC 106555 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | ||||| ||||| || || | ||||||||||| Sbjct 106554 TCGAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 106495 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 106494 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 106435 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| |||||||| || || Sbjct 106434 TTGCCCGTAAGAGTCTTGACGAA 106412 >seq13 Length=1203898 Score = 132 bits (146), Expect = 1e-25 Identities = 147/196 (75%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| |||||||| || |||||||| || || || |||| | |||||| Sbjct 755864 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCTCGGGTGCGACCATCT 755805 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| || ||||||||| Sbjct 755804 TCGAGCTGCTTGCCGGCGAAGATGAGTCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 755745 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || ||||| || || || || || || |||||| Sbjct 755744 TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACTTCAAGCGTAATCGTC 755685 Query 211083 TTTCCCGTGAGAGTCT 211098 || || || | |||| Sbjct 755684 TTGCCGGTCAAGGTCT 755669 >seq2 Length=936589 Score = 84.2 bits (92), Expect = 5e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 178120 GGCATCTTTGTACGCAATGAAGGGCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATG 178179 ||| || ||||| |||||||| | || ||| | || ||| |||| || | Sbjct 4133 GGCGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGGATCGCGTA 4074 Query 178180 CCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTA 178239 |||||||| || || ||| ||||| |||||| || || ||||||||||||| | Sbjct 4073 CCAAAGCTTTTGCGCGGGGATCGTCTTCTTGGCTCGGCCCTCCTTCTCGTACTTTTCAAA 4014 Query 178240 GAGCTCCTCGAATTCCGGTCCATAGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAA 178299 | | ||| ||| |||||||| || | |||||| || ||||| ||||||||| Sbjct 4013 CAAGACGCGGAACTCCTCGCCATAGACCTCGTGGAGACCCGGTGCCTCGGCGGGGCAGAA 3954 Query 178300 GAGACTCCACTGACCGTCTTCCTTCACTCGTTTCATGAAGAGGTCAGAGGTCCAGA 178355 || ||| | |||| | ||| || || | ||||||||| || | | |||||| Sbjct 3953 CAGGGGCCAGTCACCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGGATCCAGA 3898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151643560760